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Cluster: HRGMv2_2326_CGC27

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2326_6 HRGMv2_2326_6_8 9387 11564 + GH112
TF HRGMv2_2326_6 HRGMv2_2326_6_9 11660 12490 - HTH_AraC
TF HRGMv2_2326_6 HRGMv2_2326_6_10 12546 13574 - LacI
TC HRGMv2_2326_6 HRGMv2_2326_6_11 13824 14762 + 3.A.1.1.10
TC HRGMv2_2326_6 HRGMv2_2326_6_12 14774 15670 + 3.A.1.1.29
STP HRGMv2_2326_6 HRGMv2_2326_6_13 15690 17375 + SBP_bac_1
CAZyme HRGMv2_2326_6 HRGMv2_2326_6_14 17384 18850 + GH32
TC HRGMv2_2326_6 HRGMv2_2326_6_15 19016 19336 + 3.A.1.106.12
Gene ID: HRGMv2_2326_6_8
Type: CAZyme
Location: 9387 - 11564 (+)
Gene ID: HRGMv2_2326_6_9
Type: TF
Location: 11660 - 12490 (-)
Gene ID: HRGMv2_2326_6_10
Type: TF
Location: 12546 - 13574 (-)
Gene ID: HRGMv2_2326_6_11
Type: TC
Location: 13824 - 14762 (+)
Gene ID: HRGMv2_2326_6_12
Type: TC
Location: 14774 - 15670 (+)
Gene ID: HRGMv2_2326_6_13
Type: STP
Location: 15690 - 17375 (+)
Gene ID: HRGMv2_2326_6_14
Type: CAZyme
Location: 17384 - 18850 (+)
Gene ID: HRGMv2_2326_6_15
Type: TC
Location: 19016 - 19336 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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