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Cluster: HRGMv2_2326_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2326_5 HRGMv2_2326_5_63 69777 71540 + GH110
pfam HRGMv2_2326_5 HRGMv2_2326_5_64 71542 71778 + GIY-YIG
TF HRGMv2_2326_5 HRGMv2_2326_5_65 71775 72581 - HTH_AraC
CAZyme HRGMv2_2326_5 HRGMv2_2326_5_66 72680 73984 + GH29
TF HRGMv2_2326_5 HRGMv2_2326_5_67 74760 75458 + LytTR
STP HRGMv2_2326_5 HRGMv2_2326_5_68 75464 76126 + HATPase_c
TC HRGMv2_2326_5 HRGMv2_2326_5_69 77012 78835 + 3.A.1.111.2
TC HRGMv2_2326_5 HRGMv2_2326_5_70 78819 80690 + 3.A.1.111.2
pfam HRGMv2_2326_5 HRGMv2_2326_5_71 80780 81250 - Acetyltransf_1 | FR47 | Acetyltransf_7 | Acetyltransf_10
TC HRGMv2_2326_5 HRGMv2_2326_5_72 81334 81981 - 1.C.113.1.3
Gene ID: HRGMv2_2326_5_63
Type: CAZyme
Location: 69777 - 71540 (+)
Gene ID: HRGMv2_2326_5_64
Type: pfam
Location: 71542 - 71778 (+)
Gene ID: HRGMv2_2326_5_65
Type: TF
Location: 71775 - 72581 (-)
Gene ID: HRGMv2_2326_5_66
Type: CAZyme
Location: 72680 - 73984 (+)
Gene ID: HRGMv2_2326_5_67
Type: TF
Location: 74760 - 75458 (+)
Gene ID: HRGMv2_2326_5_68
Type: STP
Location: 75464 - 76126 (+)
Gene ID: HRGMv2_2326_5_69
Type: TC
Location: 77012 - 78835 (+)
Gene ID: HRGMv2_2326_5_70
Type: TC
Location: 78819 - 80690 (+)
Gene ID: HRGMv2_2326_5_71
Type: pfam
Location: 80780 - 81250 (-)
Gene ID: HRGMv2_2326_5_72
Type: TC
Location: 81334 - 81981 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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