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Cluster: HRGMv2_2326_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2326_5 HRGMv2_2326_5_45 52441 53469 + GT2
pfam HRGMv2_2326_5 HRGMv2_2326_5_46 53414 55258 + GT87
pfam HRGMv2_2326_5 HRGMv2_2326_5_47 55273 56451 + Fe-ADH | Fe-ADH_2 | ADH_Fe_C
TC HRGMv2_2326_5 HRGMv2_2326_5_48 56567 57913 + 2.A.66.1.33
NULL(UNKNOWN) HRGMv2_2326_5 HRGMv2_2326_5_49 58314 58532 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_2326_5 HRGMv2_2326_5_50 58737 58934 + DUF2961
CAZyme HRGMv2_2326_5 HRGMv2_2326_5_51 59016 60662 + GH123
TC HRGMv2_2326_5 HRGMv2_2326_5_52 60640 61164 - 9.B.156.3.1
Gene ID: HRGMv2_2326_5_45
Type: CAZyme
Location: 52441 - 53469 (+)
Gene ID: HRGMv2_2326_5_46
Type: pfam
Location: 53414 - 55258 (+)
Gene ID: HRGMv2_2326_5_47
Type: pfam
Location: 55273 - 56451 (+)
Gene ID: HRGMv2_2326_5_48
Type: TC
Location: 56567 - 57913 (+)
Gene ID: HRGMv2_2326_5_49
Type:
Location: 58314 - 58532 (+)
Gene ID: HRGMv2_2326_5_50
Type: pfam
Location: 58737 - 58934 (+)
Gene ID: HRGMv2_2326_5_51
Type: CAZyme
Location: 59016 - 60662 (+)
Gene ID: HRGMv2_2326_5_52
Type: TC
Location: 60640 - 61164 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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