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Cluster: HRGMv2_2326_CGC23

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2326_5 HRGMv2_2326_5_25 23299 25272 + GH78
NULL(UNKNOWN) HRGMv2_2326_5 HRGMv2_2326_5_26 25259 25576 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2326_5 HRGMv2_2326_5_27 25515 27089 + GH2
CAZyme HRGMv2_2326_5 HRGMv2_2326_5_28 27100 28107 + GH18
NULL(UNKNOWN) HRGMv2_2326_5 HRGMv2_2326_5_29 28246 28353 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2326_5 HRGMv2_2326_5_30 28705 30558 + 3.A.1.106.14
TC HRGMv2_2326_5 HRGMv2_2326_5_31 30555 32378 + 3.A.1.106.3
pfam HRGMv2_2326_5 HRGMv2_2326_5_32 32703 33443 + Transposase_31
CAZyme HRGMv2_2326_5 HRGMv2_2326_5_33 33592 36954 + CBM67 | GH78
CAZyme HRGMv2_2326_5 HRGMv2_2326_5_34 36957 39479 + GH3
Gene ID: HRGMv2_2326_5_25
Type: CAZyme
Location: 23299 - 25272 (+)
Gene ID: HRGMv2_2326_5_26
Type:
Location: 25259 - 25576 (+)
Gene ID: HRGMv2_2326_5_27
Type: CAZyme
Location: 25515 - 27089 (+)
Gene ID: HRGMv2_2326_5_28
Type: CAZyme
Location: 27100 - 28107 (+)
Gene ID: HRGMv2_2326_5_29
Type:
Location: 28246 - 28353 (+)
Gene ID: HRGMv2_2326_5_30
Type: TC
Location: 28705 - 30558 (+)
Gene ID: HRGMv2_2326_5_31
Type: TC
Location: 30555 - 32378 (+)
Gene ID: HRGMv2_2326_5_32
Type: pfam
Location: 32703 - 33443 (+)
Gene ID: HRGMv2_2326_5_33
Type: CAZyme
Location: 33592 - 36954 (+)
Gene ID: HRGMv2_2326_5_34
Type: CAZyme
Location: 36957 - 39479 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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