Cluster: HRGMv2_2326_CGC2
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2326
- CGC Family ID: CGCFAM_00869
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2326_1 | HRGMv2_2326_1_23 | 25484 | 26770 | + | GH125 |
| pfam | HRGMv2_2326_1 | HRGMv2_2326_1_24 | 26774 | 27826 | + | DUF4432 |
| TC | HRGMv2_2326_1 | HRGMv2_2326_1_25 | 28010 | 29854 | + | 8.A.59.2.1 |
Gene ID: HRGMv2_2326_1_23
Type: CAZyme
Location: 25484 - 26770 (+)
Type: CAZyme
Location: 25484 - 26770 (+)
Gene ID: HRGMv2_2326_1_24
Type: pfam
Location: 26774 - 27826 (+)
Type: pfam
Location: 26774 - 27826 (+)
Gene ID: HRGMv2_2326_1_25
Type: TC
Location: 28010 - 29854 (+)
Type: TC
Location: 28010 - 29854 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Oliverpabstia
Species
Oliverpabstia sp000432335
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.