Cluster: HRGMv2_2326_CGC18
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2326
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2326_2 | HRGMv2_2326_2_263 | 309774 | 310838 | + | GT28 |
| pfam | HRGMv2_2326_2 | HRGMv2_2326_2_264 | 310917 | 311327 | - | HIT | DcpS_C |
| STP | HRGMv2_2326_2 | HRGMv2_2326_2_265 | 311468 | 312202 | + | HATPase_c | HisKA |
| TC | HRGMv2_2326_2 | HRGMv2_2326_2_266 | 312190 | 312834 | - | 9.B.104.1.3 |
Gene ID: HRGMv2_2326_2_263
Type: CAZyme
Location: 309774 - 310838 (+)
Type: CAZyme
Location: 309774 - 310838 (+)
Gene ID: HRGMv2_2326_2_264
Type: pfam
Location: 310917 - 311327 (-)
Type: pfam
Location: 310917 - 311327 (-)
Gene ID: HRGMv2_2326_2_265
Type: STP
Location: 311468 - 312202 (+)
Type: STP
Location: 311468 - 312202 (+)
Gene ID: HRGMv2_2326_2_266
Type: TC
Location: 312190 - 312834 (-)
Type: TC
Location: 312190 - 312834 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Oliverpabstia
Species
Oliverpabstia sp000432335
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.