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Cluster: HRGMv2_2326_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2326_2 HRGMv2_2326_2_69 77958 78566 - 3.A.1.5.35
TC HRGMv2_2326_2 HRGMv2_2326_2_70 78563 79504 - 3.A.1.5.41
TC HRGMv2_2326_2 HRGMv2_2326_2_71 79514 80347 - 3.A.1.5.2
TC HRGMv2_2326_2 HRGMv2_2326_2_72 80347 81336 - 3.A.1.5.20
TC HRGMv2_2326_2 HRGMv2_2326_2_73 81540 83228 - 3.A.1.5.38
NULL(UNKNOWN) HRGMv2_2326_2 HRGMv2_2326_2_74 83580 83672 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_2326_2 HRGMv2_2326_2_75 84088 86673 - YfhO
CAZyme HRGMv2_2326_2 HRGMv2_2326_2_76 86651 87643 - GT2
Gene ID: HRGMv2_2326_2_69
Type: TC
Location: 77958 - 78566 (-)
Gene ID: HRGMv2_2326_2_70
Type: TC
Location: 78563 - 79504 (-)
Gene ID: HRGMv2_2326_2_71
Type: TC
Location: 79514 - 80347 (-)
Gene ID: HRGMv2_2326_2_72
Type: TC
Location: 80347 - 81336 (-)
Gene ID: HRGMv2_2326_2_73
Type: TC
Location: 81540 - 83228 (-)
Gene ID: HRGMv2_2326_2_74
Type:
Location: 83580 - 83672 (+)
Gene ID: HRGMv2_2326_2_75
Type: pfam
Location: 84088 - 86673 (-)
Gene ID: HRGMv2_2326_2_76
Type: CAZyme
Location: 86651 - 87643 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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