Cluster: HRGMv2_2326_CGC11
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2326
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2326_2 | HRGMv2_2326_2_37 | 44865 | 46100 | - | GH4 |
| TF | HRGMv2_2326_2 | HRGMv2_2326_2_38 | 46094 | 46300 | - | LacI |
| STP | HRGMv2_2326_2 | HRGMv2_2326_2_39 | 46569 | 47186 | - | NUDIX |
| TC | HRGMv2_2326_2 | HRGMv2_2326_2_40 | 47211 | 47840 | - | 2.A.87.1.4 |
Gene ID: HRGMv2_2326_2_37
Type: CAZyme
Location: 44865 - 46100 (-)
Type: CAZyme
Location: 44865 - 46100 (-)
Gene ID: HRGMv2_2326_2_38
Type: TF
Location: 46094 - 46300 (-)
Type: TF
Location: 46094 - 46300 (-)
Gene ID: HRGMv2_2326_2_39
Type: STP
Location: 46569 - 47186 (-)
Type: STP
Location: 46569 - 47186 (-)
Gene ID: HRGMv2_2326_2_40
Type: TC
Location: 47211 - 47840 (-)
Type: TC
Location: 47211 - 47840 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Oliverpabstia
Species
Oliverpabstia sp000432335
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.