Cluster: HRGMv2_2326_CGC10
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2326
- CGC Family ID: CGCFAM_10044
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2326_2 | HRGMv2_2326_2_21 | 27515 | 28876 | + | 2.A.40.7.6 |
| CAZyme | HRGMv2_2326_2 | HRGMv2_2326_2_22 | 28947 | 29717 | - | CE4 |
| pfam | HRGMv2_2326_2 | HRGMv2_2326_2_23 | 29800 | 30300 | - | Sm_multidrug_ex |
| STP | HRGMv2_2326_2 | HRGMv2_2326_2_24 | 30311 | 31369 | - | Aminotran_1_2 |
| TC | HRGMv2_2326_2 | HRGMv2_2326_2_25 | 31446 | 33176 | - | 3.A.1.106.2 |
| NULL(UNKNOWN) | HRGMv2_2326_2 | HRGMv2_2326_2_26 | 33344 | 33490 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2326_2 | HRGMv2_2326_2_27 | 33503 | 34639 | - | 3.B.1.1.5 |
Gene ID: HRGMv2_2326_2_21
Type: TC
Location: 27515 - 28876 (+)
Type: TC
Location: 27515 - 28876 (+)
Gene ID: HRGMv2_2326_2_22
Type: CAZyme
Location: 28947 - 29717 (-)
Type: CAZyme
Location: 28947 - 29717 (-)
Gene ID: HRGMv2_2326_2_23
Type: pfam
Location: 29800 - 30300 (-)
Type: pfam
Location: 29800 - 30300 (-)
Gene ID: HRGMv2_2326_2_24
Type: STP
Location: 30311 - 31369 (-)
Type: STP
Location: 30311 - 31369 (-)
Gene ID: HRGMv2_2326_2_25
Type: TC
Location: 31446 - 33176 (-)
Type: TC
Location: 31446 - 33176 (-)
Gene ID: HRGMv2_2326_2_26
Type:
Location: 33344 - 33490 (-)
Type:
Location: 33344 - 33490 (-)
Gene ID: HRGMv2_2326_2_27
Type: TC
Location: 33503 - 34639 (-)
Type: TC
Location: 33503 - 34639 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Oliverpabstia
Species
Oliverpabstia sp000432335
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.