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Cluster: HRGMv2_2325_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2325_2 HRGMv2_2325_2_22 23089 24096 + 3.A.1.14.10
TC HRGMv2_2325_2 HRGMv2_2325_2_23 24086 25147 + 3.A.1.14.10
TC HRGMv2_2325_2 HRGMv2_2325_2_24 25162 26223 + 3.A.1.14.10
TC HRGMv2_2325_2 HRGMv2_2325_2_25 26213 27001 + 3.A.1.14.10
pfam HRGMv2_2325_2 HRGMv2_2325_2_26 27036 27437 + DUF454
pfam HRGMv2_2325_2 HRGMv2_2325_2_27 27538 28374 + BacA
CAZyme HRGMv2_2325_2 HRGMv2_2325_2_28 28468 30279 + GH13_11
Gene ID: HRGMv2_2325_2_22
Type: TC
Location: 23089 - 24096 (+)
Gene ID: HRGMv2_2325_2_23
Type: TC
Location: 24086 - 25147 (+)
Gene ID: HRGMv2_2325_2_24
Type: TC
Location: 25162 - 26223 (+)
Gene ID: HRGMv2_2325_2_25
Type: TC
Location: 26213 - 27001 (+)
Gene ID: HRGMv2_2325_2_26
Type: pfam
Location: 27036 - 27437 (+)
Gene ID: HRGMv2_2325_2_27
Type: pfam
Location: 27538 - 28374 (+)
Gene ID: HRGMv2_2325_2_28
Type: CAZyme
Location: 28468 - 30279 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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