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Cluster: HRGMv2_2325_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2325_22 HRGMv2_2325_22_10 11948 12631 + 9.B.120.1.3
STP HRGMv2_2325_22 HRGMv2_2325_22_11 12734 14026 + ACT
pfam HRGMv2_2325_22 HRGMv2_2325_22_12 14107 14937 + PNP_UDP_1
TC HRGMv2_2325_22 HRGMv2_2325_22_13 14960 16339 + 2.A.38.1.1
TC HRGMv2_2325_22 HRGMv2_2325_22_14 16343 17782 + 2.A.38.1.1
CAZyme HRGMv2_2325_22 HRGMv2_2325_22_15 17786 18493 - CE4
TC HRGMv2_2325_22 HRGMv2_2325_22_16 18550 19467 - 2.A.19.5.2
NULL(UNKNOWN) HRGMv2_2325_22 HRGMv2_2325_22_17 19473 19742 - NULL(UNKNOWN)
[View Structural Homologs]
TF HRGMv2_2325_22 HRGMv2_2325_22_18 19892 20413 + HTH_11
TC HRGMv2_2325_22 HRGMv2_2325_22_19 20428 21498 + 9.A.23.1.1
Gene ID: HRGMv2_2325_22_10
Type: TC
Location: 11948 - 12631 (+)
Gene ID: HRGMv2_2325_22_11
Type: STP
Location: 12734 - 14026 (+)
Gene ID: HRGMv2_2325_22_12
Type: pfam
Location: 14107 - 14937 (+)
Gene ID: HRGMv2_2325_22_13
Type: TC
Location: 14960 - 16339 (+)
Gene ID: HRGMv2_2325_22_14
Type: TC
Location: 16343 - 17782 (+)
Gene ID: HRGMv2_2325_22_15
Type: CAZyme
Location: 17786 - 18493 (-)
Gene ID: HRGMv2_2325_22_16
Type: TC
Location: 18550 - 19467 (-)
Gene ID: HRGMv2_2325_22_17
Type:
Location: 19473 - 19742 (-)
Gene ID: HRGMv2_2325_22_18
Type: TF
Location: 19892 - 20413 (+)
Gene ID: HRGMv2_2325_22_19
Type: TC
Location: 20428 - 21498 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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