Cluster: HRGMv2_2322_CGC9
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2322
- CGC Family ID: CGCFAM_02348
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2322_8 | HRGMv2_2322_8_54 | 58047 | 59813 | + | 3.A.2.2.2 |
| TC | HRGMv2_2322_8 | HRGMv2_2322_8_55 | 59814 | 61184 | + | 3.A.2.2.2 |
| TC | HRGMv2_2322_8 | HRGMv2_2322_8_56 | 61226 | 61888 | + | 3.A.2.2.2 |
| NULL(UNKNOWN) | HRGMv2_2322_8 | HRGMv2_2322_8_57 | 62133 | 62273 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2322_8 | HRGMv2_2322_8_58 | 62335 | 69051 | + | CBM32 | GH31_18 |
Gene ID: HRGMv2_2322_8_54
Type: TC
Location: 58047 - 59813 (+)
Type: TC
Location: 58047 - 59813 (+)
Gene ID: HRGMv2_2322_8_55
Type: TC
Location: 59814 - 61184 (+)
Type: TC
Location: 59814 - 61184 (+)
Gene ID: HRGMv2_2322_8_56
Type: TC
Location: 61226 - 61888 (+)
Type: TC
Location: 61226 - 61888 (+)
Gene ID: HRGMv2_2322_8_57
Type:
Location: 62133 - 62273 (+)
Type:
Location: 62133 - 62273 (+)
Gene ID: HRGMv2_2322_8_58
Type: CAZyme
Location: 62335 - 69051 (+)
Type: CAZyme
Location: 62335 - 69051 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Species
Mediterraneibacter sp900752395
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.