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Cluster: HRGMv2_2322_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2322_7 HRGMv2_2322_7_13 15120 16112 + 8.A.5.1.4
TF HRGMv2_2322_7 HRGMv2_2322_7_14 16183 17046 + HTH_DeoR
TC HRGMv2_2322_7 HRGMv2_2322_7_15 17455 18801 + 2.A.23.1.2
CAZyme HRGMv2_2322_7 HRGMv2_2322_7_16 19000 21579 - GT51
pfam HRGMv2_2322_7 HRGMv2_2322_7_17 21822 22475 + UPF0029 | DUF1949
TC HRGMv2_2322_7 HRGMv2_2322_7_18 22853 23455 + 2.A.115.2.14
TC HRGMv2_2322_7 HRGMv2_2322_7_19 23448 24833 + 2.A.66.1.13
Gene ID: HRGMv2_2322_7_13
Type: TC
Location: 15120 - 16112 (+)
Gene ID: HRGMv2_2322_7_14
Type: TF
Location: 16183 - 17046 (+)
Gene ID: HRGMv2_2322_7_15
Type: TC
Location: 17455 - 18801 (+)
Gene ID: HRGMv2_2322_7_16
Type: CAZyme
Location: 19000 - 21579 (-)
Gene ID: HRGMv2_2322_7_17
Type: pfam
Location: 21822 - 22475 (+)
Gene ID: HRGMv2_2322_7_18
Type: TC
Location: 22853 - 23455 (+)
Gene ID: HRGMv2_2322_7_19
Type: TC
Location: 23448 - 24833 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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