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Cluster: HRGMv2_2322_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2322_6 HRGMv2_2322_6_68 76850 78541 - GH13_31
TC HRGMv2_2322_6 HRGMv2_2322_6_69 78534 78956 - 4.A.6.1.19
TC HRGMv2_2322_6 HRGMv2_2322_6_70 78986 79840 - 4.A.6.1.13
TC HRGMv2_2322_6 HRGMv2_2322_6_71 79833 80621 - 4.A.6.1.13
TC HRGMv2_2322_6 HRGMv2_2322_6_72 80660 81118 - 4.A.6.1.13
TF HRGMv2_2322_6 HRGMv2_2322_6_73 81256 82263 - LacI
TC HRGMv2_2322_6 HRGMv2_2322_6_74 82448 83806 - 2.A.26.1.3
Gene ID: HRGMv2_2322_6_68
Type: CAZyme
Location: 76850 - 78541 (-)
Gene ID: HRGMv2_2322_6_69
Type: TC
Location: 78534 - 78956 (-)
Gene ID: HRGMv2_2322_6_70
Type: TC
Location: 78986 - 79840 (-)
Gene ID: HRGMv2_2322_6_71
Type: TC
Location: 79833 - 80621 (-)
Gene ID: HRGMv2_2322_6_72
Type: TC
Location: 80660 - 81118 (-)
Gene ID: HRGMv2_2322_6_73
Type: TF
Location: 81256 - 82263 (-)
Gene ID: HRGMv2_2322_6_74
Type: TC
Location: 82448 - 83806 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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