Cluster: HRGMv2_2322_CGC4
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2322
- CGC Family ID: CGCFAM_04374
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2322_4 | HRGMv2_2322_4_103 | 107013 | 110615 | + | GH136 |
| TF | HRGMv2_2322_4 | HRGMv2_2322_4_104 | 110745 | 111617 | - | HTH_AraC | HTH_AraC |
| TC | HRGMv2_2322_4 | HRGMv2_2322_4_105 | 111789 | 114125 | + | 9.A.8.1.6 |
Gene ID: HRGMv2_2322_4_103
Type: CAZyme
Location: 107013 - 110615 (+)
Type: CAZyme
Location: 107013 - 110615 (+)
Gene ID: HRGMv2_2322_4_104
Type: TF
Location: 110745 - 111617 (-)
Type: TF
Location: 110745 - 111617 (-)
Gene ID: HRGMv2_2322_4_105
Type: TC
Location: 111789 - 114125 (+)
Type: TC
Location: 111789 - 114125 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Species
Mediterraneibacter sp900752395
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.