Cluster: HRGMv2_2322_CGC25
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2322
- CGC Family ID: CGCFAM_10042
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2322_32 | HRGMv2_2322_32_1 | 2 | 1462 | - | GH25 |
| pfam | HRGMv2_2322_32 | HRGMv2_2322_32_2 | 1787 | 3331 | - | LytR_cpsA_psr |
| pfam | HRGMv2_2322_32 | HRGMv2_2322_32_3 | 3395 | 4306 | - | NTP_transferase |
| TC | HRGMv2_2322_32 | HRGMv2_2322_32_4 | 4380 | 4787 | - | 8.A.8.1.6 |
Gene ID: HRGMv2_2322_32_1
Type: CAZyme
Location: 2 - 1462 (-)
Type: CAZyme
Location: 2 - 1462 (-)
Gene ID: HRGMv2_2322_32_2
Type: pfam
Location: 1787 - 3331 (-)
Type: pfam
Location: 1787 - 3331 (-)
Gene ID: HRGMv2_2322_32_3
Type: pfam
Location: 3395 - 4306 (-)
Type: pfam
Location: 3395 - 4306 (-)
Gene ID: HRGMv2_2322_32_4
Type: TC
Location: 4380 - 4787 (-)
Type: TC
Location: 4380 - 4787 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Species
Mediterraneibacter sp900752395
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.