Cluster: HRGMv2_2322_CGC24
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2322
- CGC Family ID: CGCFAM_00156
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2322_28 | HRGMv2_2322_28_24 | 20149 | 21165 | + | GT2 |
| NULL(UNKNOWN) | HRGMv2_2322_28 | HRGMv2_2322_28_25 | 21266 | 21943 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2322_28 | HRGMv2_2322_28_26 | 21933 | 22970 | + | 4.D.2.1.5 |
| TC | HRGMv2_2322_28 | HRGMv2_2322_28_27 | 23068 | 24876 | + | 3.A.1.120.6 |
Gene ID: HRGMv2_2322_28_24
Type: CAZyme
Location: 20149 - 21165 (+)
Type: CAZyme
Location: 20149 - 21165 (+)
Gene ID: HRGMv2_2322_28_25
Type:
Location: 21266 - 21943 (+)
Type:
Location: 21266 - 21943 (+)
Gene ID: HRGMv2_2322_28_26
Type: TC
Location: 21933 - 22970 (+)
Type: TC
Location: 21933 - 22970 (+)
Gene ID: HRGMv2_2322_28_27
Type: TC
Location: 23068 - 24876 (+)
Type: TC
Location: 23068 - 24876 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Species
Mediterraneibacter sp900752395
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.