Cluster: HRGMv2_2322_CGC23
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2322
- CGC Family ID: CGCFAM_07514
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2322_27 | HRGMv2_2322_27_16 | 19037 | 19663 | + | 1.A.16.5.1 |
| pfam | HRGMv2_2322_27 | HRGMv2_2322_27_17 | 19801 | 21003 | + | Flavoprotein | DFP |
| TC | HRGMv2_2322_27 | HRGMv2_2322_27_18 | 21159 | 21974 | + | 2.A.87.2.3 |
| pfam | HRGMv2_2322_27 | HRGMv2_2322_27_19 | 21958 | 22725 | + | Pan_kinase |
| CAZyme | HRGMv2_2322_27 | HRGMv2_2322_27_20 | 23050 | 28458 | + | GH95 |
Gene ID: HRGMv2_2322_27_16
Type: TC
Location: 19037 - 19663 (+)
Type: TC
Location: 19037 - 19663 (+)
Gene ID: HRGMv2_2322_27_17
Type: pfam
Location: 19801 - 21003 (+)
Type: pfam
Location: 19801 - 21003 (+)
Gene ID: HRGMv2_2322_27_18
Type: TC
Location: 21159 - 21974 (+)
Type: TC
Location: 21159 - 21974 (+)
Gene ID: HRGMv2_2322_27_19
Type: pfam
Location: 21958 - 22725 (+)
Type: pfam
Location: 21958 - 22725 (+)
Gene ID: HRGMv2_2322_27_20
Type: CAZyme
Location: 23050 - 28458 (+)
Type: CAZyme
Location: 23050 - 28458 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Species
Mediterraneibacter sp900752395
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.