Cluster: HRGMv2_2322_CGC22
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2322
- CGC Family ID: CGCFAM_10041
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2322_21 | HRGMv2_2322_21_10 | 11560 | 15600 | - | GH51_9 |
| pfam | HRGMv2_2322_21 | HRGMv2_2322_21_11 | 15914 | 16858 | - | Mem_trans |
| TC | HRGMv2_2322_21 | HRGMv2_2322_21_12 | 16984 | 20583 | - | 3.A.1.122.2 |
| pfam | HRGMv2_2322_21 | HRGMv2_2322_21_13 | 20767 | 21207 | - | SpoVAB |
| TC | HRGMv2_2322_21 | HRGMv2_2322_21_14 | 21204 | 21869 | - | 9.A.11.1.1 |
Gene ID: HRGMv2_2322_21_10
Type: CAZyme
Location: 11560 - 15600 (-)
Type: CAZyme
Location: 11560 - 15600 (-)
Gene ID: HRGMv2_2322_21_11
Type: pfam
Location: 15914 - 16858 (-)
Type: pfam
Location: 15914 - 16858 (-)
Gene ID: HRGMv2_2322_21_12
Type: TC
Location: 16984 - 20583 (-)
Type: TC
Location: 16984 - 20583 (-)
Gene ID: HRGMv2_2322_21_13
Type: pfam
Location: 20767 - 21207 (-)
Type: pfam
Location: 20767 - 21207 (-)
Gene ID: HRGMv2_2322_21_14
Type: TC
Location: 21204 - 21869 (-)
Type: TC
Location: 21204 - 21869 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Species
Mediterraneibacter sp900752395
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.