Cluster: HRGMv2_2322_CGC21
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 2
- Substrate: alpha-glucan
- Genome ID: HRGMv2_2322
- CGC Family ID: CGCFAM_00580
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2322_21 | HRGMv2_2322_21_3 | 1984 | 2445 | + | 9.A.11.1.1 |
| CAZyme | HRGMv2_2322_21 | HRGMv2_2322_21_4 | 2476 | 3960 | - | GH77 |
| CAZyme | HRGMv2_2322_21 | HRGMv2_2322_21_5 | 4063 | 6324 | - | GT35 |
Gene ID: HRGMv2_2322_21_3
Type: TC
Location: 1984 - 2445 (+)
Type: TC
Location: 1984 - 2445 (+)
Gene ID: HRGMv2_2322_21_4
Type: CAZyme
Location: 2476 - 3960 (-)
Type: CAZyme
Location: 2476 - 3960 (-)
Gene ID: HRGMv2_2322_21_5
Type: CAZyme
Location: 4063 - 6324 (-)
Type: CAZyme
Location: 4063 - 6324 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Species
Mediterraneibacter sp900752395
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.