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Cluster: HRGMv2_2322_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2322_20 HRGMv2_2322_20_6 5208 6104 - 3.A.1.126.1
pfam HRGMv2_2322_20 HRGMv2_2322_20_7 6120 7103 - 2-Hacid_dh | 2-Hacid_dh_C | NAD_binding_2
CAZyme HRGMv2_2322_20 HRGMv2_2322_20_8 7235 8020 + CE4
TC HRGMv2_2322_20 HRGMv2_2322_20_9 8029 8811 - 2.A.5.5.2
NULL(UNKNOWN) HRGMv2_2322_20 HRGMv2_2322_20_10 9154 9576 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_2322_20 HRGMv2_2322_20_11 9709 11355 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2322_20 HRGMv2_2322_20_12 11371 12816 - 2.A.38.1.1
TC HRGMv2_2322_20 HRGMv2_2322_20_13 12821 14191 - 2.A.38.1.1
Gene ID: HRGMv2_2322_20_6
Type: TC
Location: 5208 - 6104 (-)
Gene ID: HRGMv2_2322_20_7
Type: pfam
Location: 6120 - 7103 (-)
Gene ID: HRGMv2_2322_20_8
Type: CAZyme
Location: 7235 - 8020 (+)
Gene ID: HRGMv2_2322_20_9
Type: TC
Location: 8029 - 8811 (-)
Gene ID: HRGMv2_2322_20_10
Type:
Location: 9154 - 9576 (+)
Gene ID: HRGMv2_2322_20_11
Type:
Location: 9709 - 11355 (-)
Gene ID: HRGMv2_2322_20_12
Type: TC
Location: 11371 - 12816 (-)
Gene ID: HRGMv2_2322_20_13
Type: TC
Location: 12821 - 14191 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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