Cluster: HRGMv2_2322_CGC19
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2322
- CGC Family ID: CGCFAM_00130
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2322_19 | HRGMv2_2322_19_26 | 36570 | 38507 | + | 4.A.1.2.13 |
| CAZyme | HRGMv2_2322_19 | HRGMv2_2322_19_27 | 38520 | 40250 | + | GH13_29 |
| pfam | HRGMv2_2322_19 | HRGMv2_2322_19_28 | 40266 | 40727 | + | HSP20 |
| TC | HRGMv2_2322_19 | HRGMv2_2322_19_29 | 40949 | 42322 | + | 2.A.66.1.32 |
Gene ID: HRGMv2_2322_19_26
Type: TC
Location: 36570 - 38507 (+)
Type: TC
Location: 36570 - 38507 (+)
Gene ID: HRGMv2_2322_19_27
Type: CAZyme
Location: 38520 - 40250 (+)
Type: CAZyme
Location: 38520 - 40250 (+)
Gene ID: HRGMv2_2322_19_28
Type: pfam
Location: 40266 - 40727 (+)
Type: pfam
Location: 40266 - 40727 (+)
Gene ID: HRGMv2_2322_19_29
Type: TC
Location: 40949 - 42322 (+)
Type: TC
Location: 40949 - 42322 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Species
Mediterraneibacter sp900752395
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.