Cluster: HRGMv2_2322_CGC17
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2322
- CGC Family ID: CGCFAM_00073
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2322_15 | HRGMv2_2322_15_36 | 41426 | 42694 | - | GT4 |
| CAZyme | HRGMv2_2322_15 | HRGMv2_2322_15_37 | 42691 | 43725 | - | GT2 |
| TC | HRGMv2_2322_15 | HRGMv2_2322_15_38 | 43754 | 44506 | - | 3.A.1.103.5 |
| TC | HRGMv2_2322_15 | HRGMv2_2322_15_39 | 44524 | 45315 | - | 3.A.1.103.6 |
Gene ID: HRGMv2_2322_15_36
Type: CAZyme
Location: 41426 - 42694 (-)
Type: CAZyme
Location: 41426 - 42694 (-)
Gene ID: HRGMv2_2322_15_37
Type: CAZyme
Location: 42691 - 43725 (-)
Type: CAZyme
Location: 42691 - 43725 (-)
Gene ID: HRGMv2_2322_15_38
Type: TC
Location: 43754 - 44506 (-)
Type: TC
Location: 43754 - 44506 (-)
Gene ID: HRGMv2_2322_15_39
Type: TC
Location: 44524 - 45315 (-)
Type: TC
Location: 44524 - 45315 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Species
Mediterraneibacter sp900752395
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.