Cluster: HRGMv2_2322_CGC15
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2322
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2322_13 | HRGMv2_2322_13_11 | 14071 | 15048 | - | 2.A.115.1.2 |
| pfam | HRGMv2_2322_13 | HRGMv2_2322_13_12 | 15194 | 15928 | + | ATP_bind_3 |
| CAZyme | HRGMv2_2322_13 | HRGMv2_2322_13_13 | 16028 | 21079 | - | CBM32 | GH84 |
| TC | HRGMv2_2322_13 | HRGMv2_2322_13_14 | 21309 | 21956 | - | 2.A.115.2.14 |
Gene ID: HRGMv2_2322_13_11
Type: TC
Location: 14071 - 15048 (-)
Type: TC
Location: 14071 - 15048 (-)
Gene ID: HRGMv2_2322_13_12
Type: pfam
Location: 15194 - 15928 (+)
Type: pfam
Location: 15194 - 15928 (+)
Gene ID: HRGMv2_2322_13_13
Type: CAZyme
Location: 16028 - 21079 (-)
Type: CAZyme
Location: 16028 - 21079 (-)
Gene ID: HRGMv2_2322_13_14
Type: TC
Location: 21309 - 21956 (-)
Type: TC
Location: 21309 - 21956 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Species
Mediterraneibacter sp900752395
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.