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Cluster: HRGMv2_2322_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2322_11 HRGMv2_2322_11_15 28563 30641 - GH13_9
NULL(UNKNOWN) HRGMv2_2322_11 HRGMv2_2322_11_16 30825 34586 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_2322_11 HRGMv2_2322_11_17 35020 35109 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2322_11 HRGMv2_2322_11_18 35552 42187 - CBM32 | CBM32
pfam HRGMv2_2322_11 HRGMv2_2322_11_19 42463 45111 + YfhO
pfam HRGMv2_2322_11 HRGMv2_2322_11_20 45133 45579 + GtrA_DPMS_TM
CAZyme HRGMv2_2322_11 HRGMv2_2322_11_21 45563 46609 + GT2
TC HRGMv2_2322_11 HRGMv2_2322_11_22 46629 48524 - 3.A.1.135.5
TC HRGMv2_2322_11 HRGMv2_2322_11_23 48517 50250 - 3.A.1.135.5
Gene ID: HRGMv2_2322_11_15
Type: CAZyme
Location: 28563 - 30641 (-)
Gene ID: HRGMv2_2322_11_16
Type:
Location: 30825 - 34586 (-)
Gene ID: HRGMv2_2322_11_17
Type:
Location: 35020 - 35109 (-)
Gene ID: HRGMv2_2322_11_18
Type: CAZyme
Location: 35552 - 42187 (-)
Gene ID: HRGMv2_2322_11_19
Type: pfam
Location: 42463 - 45111 (+)
Gene ID: HRGMv2_2322_11_20
Type: pfam
Location: 45133 - 45579 (+)
Gene ID: HRGMv2_2322_11_21
Type: CAZyme
Location: 45563 - 46609 (+)
Gene ID: HRGMv2_2322_11_22
Type: TC
Location: 46629 - 48524 (-)
Gene ID: HRGMv2_2322_11_23
Type: TC
Location: 48517 - 50250 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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