Cluster: HRGMv2_2322_CGC13
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2322
- CGC Family ID: CGCFAM_10039
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2322_11 | HRGMv2_2322_11_6 | 6245 | 7471 | - | 3.D.10.1.4 |
| pfam | HRGMv2_2322_11 | HRGMv2_2322_11_7 | 7626 | 8531 | - | NadA |
| CAZyme | HRGMv2_2322_11 | HRGMv2_2322_11_8 | 9164 | 14725 | - | GH84 |
| pfam | HRGMv2_2322_11 | HRGMv2_2322_11_9 | 14954 | 15784 | - | PHP |
| CAZyme | HRGMv2_2322_11 | HRGMv2_2322_11_10 | 16010 | 21274 | - | CBM32 | GH36 |
Gene ID: HRGMv2_2322_11_6
Type: TC
Location: 6245 - 7471 (-)
Type: TC
Location: 6245 - 7471 (-)
Gene ID: HRGMv2_2322_11_7
Type: pfam
Location: 7626 - 8531 (-)
Type: pfam
Location: 7626 - 8531 (-)
Gene ID: HRGMv2_2322_11_8
Type: CAZyme
Location: 9164 - 14725 (-)
Type: CAZyme
Location: 9164 - 14725 (-)
Gene ID: HRGMv2_2322_11_9
Type: pfam
Location: 14954 - 15784 (-)
Type: pfam
Location: 14954 - 15784 (-)
Gene ID: HRGMv2_2322_11_10
Type: CAZyme
Location: 16010 - 21274 (-)
Type: CAZyme
Location: 16010 - 21274 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Species
Mediterraneibacter sp900752395
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.