Cluster: HRGMv2_2322_CGC11
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2322
- CGC Family ID: CGCFAM_00682
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2322_10 | HRGMv2_2322_10_44 | 43082 | 44455 | - | 2.A.66.1.28 |
| pfam | HRGMv2_2322_10 | HRGMv2_2322_10_45 | 44510 | 45487 | - | BcrAD_BadFG |
| pfam | HRGMv2_2322_10 | HRGMv2_2322_10_46 | 45484 | 46548 | - | Amidohydro_2 |
| TC | HRGMv2_2322_10 | HRGMv2_2322_10_47 | 46604 | 47440 | - | 3.A.1.1.34 |
| TC | HRGMv2_2322_10 | HRGMv2_2322_10_48 | 47452 | 48327 | - | 3.A.1.1.20 |
| STP | HRGMv2_2322_10 | HRGMv2_2322_10_49 | 48423 | 49706 | - | SBP_bac_1 |
| CAZyme | HRGMv2_2322_10 | HRGMv2_2322_10_50 | 49687 | 51045 | - | GH4 |
Gene ID: HRGMv2_2322_10_44
Type: TC
Location: 43082 - 44455 (-)
Type: TC
Location: 43082 - 44455 (-)
Gene ID: HRGMv2_2322_10_45
Type: pfam
Location: 44510 - 45487 (-)
Type: pfam
Location: 44510 - 45487 (-)
Gene ID: HRGMv2_2322_10_46
Type: pfam
Location: 45484 - 46548 (-)
Type: pfam
Location: 45484 - 46548 (-)
Gene ID: HRGMv2_2322_10_47
Type: TC
Location: 46604 - 47440 (-)
Type: TC
Location: 46604 - 47440 (-)
Gene ID: HRGMv2_2322_10_48
Type: TC
Location: 47452 - 48327 (-)
Type: TC
Location: 47452 - 48327 (-)
Gene ID: HRGMv2_2322_10_49
Type: STP
Location: 48423 - 49706 (-)
Type: STP
Location: 48423 - 49706 (-)
Gene ID: HRGMv2_2322_10_50
Type: CAZyme
Location: 49687 - 51045 (-)
Type: CAZyme
Location: 49687 - 51045 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Species
Mediterraneibacter sp900752395
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.