Cluster: HRGMv2_2322_CGC1
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2322
- CGC Family ID: CGCFAM_03768
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2322_3 | HRGMv2_2322_3_75 | 82705 | 84654 | - | 3.A.1.121.4 |
| pfam | HRGMv2_2322_3 | HRGMv2_2322_3_76 | 84915 | 85778 | - | DegV |
| TC | HRGMv2_2322_3 | HRGMv2_2322_3_77 | 85946 | 87313 | - | 9.A.11.1.1 |
| CAZyme | HRGMv2_2322_3 | HRGMv2_2322_3_78 | 87522 | 88196 | - | GT51 |
Gene ID: HRGMv2_2322_3_75
Type: TC
Location: 82705 - 84654 (-)
Type: TC
Location: 82705 - 84654 (-)
Gene ID: HRGMv2_2322_3_76
Type: pfam
Location: 84915 - 85778 (-)
Type: pfam
Location: 84915 - 85778 (-)
Gene ID: HRGMv2_2322_3_77
Type: TC
Location: 85946 - 87313 (-)
Type: TC
Location: 85946 - 87313 (-)
Gene ID: HRGMv2_2322_3_78
Type: CAZyme
Location: 87522 - 88196 (-)
Type: CAZyme
Location: 87522 - 88196 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Species
Mediterraneibacter sp900752395
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.