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Cluster: HRGMv2_2318_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2318_5 HRGMv2_2318_5_20 20943 21932 + 3.A.1.1.10
STP HRGMv2_2318_5 HRGMv2_2318_5_21 21980 23722 + SBP_bac_1
TC HRGMv2_2318_5 HRGMv2_2318_5_22 23784 24704 + 3.A.1.1.29
STP HRGMv2_2318_5 HRGMv2_2318_5_23 24793 25731 + PfkB
CAZyme HRGMv2_2318_5 HRGMv2_2318_5_24 25741 27099 + GH4
CAZyme HRGMv2_2318_5 HRGMv2_2318_5_25 27121 30222 + GH38
peptidase HRGMv2_2318_5 HRGMv2_2318_5_26 30244 31734 + M17.UPW
NULL(UNKNOWN) HRGMv2_2318_5 HRGMv2_2318_5_27 31754 33322 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2318_5 HRGMv2_2318_5_28 33346 34041 + 9.B.20.1.4
Gene ID: HRGMv2_2318_5_20
Type: TC
Location: 20943 - 21932 (+)
Gene ID: HRGMv2_2318_5_21
Type: STP
Location: 21980 - 23722 (+)
Gene ID: HRGMv2_2318_5_22
Type: TC
Location: 23784 - 24704 (+)
Gene ID: HRGMv2_2318_5_23
Type: STP
Location: 24793 - 25731 (+)
Gene ID: HRGMv2_2318_5_24
Type: CAZyme
Location: 25741 - 27099 (+)
Gene ID: HRGMv2_2318_5_25
Type: CAZyme
Location: 27121 - 30222 (+)
Gene ID: HRGMv2_2318_5_26
Type: peptidase
Location: 30244 - 31734 (+)
Gene ID: HRGMv2_2318_5_27
Type:
Location: 31754 - 33322 (+)
Gene ID: HRGMv2_2318_5_28
Type: TC
Location: 33346 - 34041 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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