PROTEIN: HRGMv2_2318_5_27
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Protein File & Metadata
Source:
HRGMv2_2318_5_27.pdb
Genome ID:
Protein ID:
HRGMv2_2318_5_27
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Protein Sequence
MKNYTFDTYI SKEVLENYLS RSVSAAFFIH TKTLEDDLRA LKNMGVKFVG RASGIWEPDE 60 SDEEHFKKSK YLADRIHEMD PEIILQACIF EAVYFYEDNF EIPPYVFEAF GLPVEDRCFR 120 VKDMLFLEKP NGFVWGNEGG IPDLSRSEAR MWFYYRATQY IDAGYEALHM GQIHLYTAND 180 RGMKKMAELI QMIRDYAKVH ARRHKVLMDA HSHGININGK LLLDYHAMPF TRVPLLDRGG 240 EKLVMVREGF SEGGENPNGW SDDVMPFLME YDNWGGKVLD DFSQYSYEER ATKDWWGYDQ 300 IGWFANQDEE GQRHFLEYTY KWTAINNVNA YFEVPFRRTL DKAAVKMKRA DNGQWDYQDY 360 YQINTKSKDC PMGFSQEETV KRLWESGDKL RKQAGNPKHL IDYGCREVYD EETGIKLPEK 420 VVVYGSFQPY VGAVANDSNS EVTRMYYIGE GIYTLSVVLP FAGEFDYAIS TYGTLSATYC 480 YDNYPRSGSS NKGIFKTTKD NTVVRFRYKF IDHQVTLEIF ED 522
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A7G7MQT5-F1-model_v4 | GH13 | 10 | 522 | 1 | 414 | 0.5815 |
0.6646 |
| AF-A0A7Z2VP05-F1-model_v4 | CBM23 | 1 | 522 | 29 | 730 | 0.5802 |
0.7326 |
| AF-A0A7G5FC06-F1-model_v4 | GH13 | 11 | 522 | 1 | 382 | 0.578 |
0.6831 |
| AF-A0A1G8CVJ0-F1-model_v4 | GH13 | 6 | 522 | 1 | 431 | 0.574 |
0.6449 |
| AF-A0A3Q9G3Q8-F1-model_v4 | GH13 | 9 | 522 | 1 | 394 | 0.5701 |
0.6686 |
| AF-A0A1B0ZK24-F1-model_v4 | GH13 | 12 | 522 | 1 | 410 | 0.564 |
0.6506 |
| AF-Q3IZB5-F1-model_v4 | GH13_16 | 3 | 522 | 3 | 543 | 0.5614 |
0.5975 |
| A0A9E6THL9 | GH13_16 | 9 | 506 | 1 | 534 | 0.5552 |
0.6133 |
| AF-X4ZP58-F1-model_v4 | GH13_36 | 10 | 520 | 26 | 522 | 0.5476 |
0.594 |
| AF-S0EUF4-F1-model_v4 | GH27 | 8 | 516 | 22 | 437 | 0.534 |
0.6255 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A7Z2VP05 | CBM23 | 1 | 522 | 29 | 730 | 0.5802 |
0.7326 |
| A0A3Q9G3Q8 | GH13 | 9 | 522 | 1 | 394 | 0.5701 |
0.6686 |
| WDE98873.1 | GH168 | 1 | 522 | 24 | 398 | 0.5665 |
0.6909 |
| W0IA35 | GH5_19 | 13 | 517 | 1 | 400 | 0.5564 |
0.6433 |
| A0A4Y6PRB4 | GH13_16 | 11 | 507 | 1 | 538 | 0.5552 |
0.6145 |
| A0A9E6THL9 | GH13_16 | 9 | 506 | 1 | 534 | 0.5552 |
0.6133 |
| UXX79850.1 | GH168 | 10 | 522 | 63 | 424 | 0.5386 |
0.6971 |
| BDU49622.1 | GH13_36 | 8 | 522 | 95 | 573 | 0.5207 |
0.6038 |
| A0A068NQ53 | GH36 | 9 | 516 | 120 | 518 | 0.5194 |
0.6748 |
| UUM24741.1 | GH13 | 7 | 514 | 59 | 609 | 0.5168 |
0.587 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 4nzf-assembly1.cif.gz_A | 8 | 507 | 3 | 427 | 0.5466 |
0.6226 |
| 4nx0-assembly1.cif.gz_D | 8 | 522 | 4 | 426 | 0.5448 |
0.6254 |
| 1wzl-assembly1.cif.gz_A | 10 | 520 | 123 | 583 | 0.5023 |
0.6067 |
| 5awq-assembly1.cif.gz_A | 9 | 515 | 15 | 484 | 0.475 |
0.5683 |
| 8dge-assembly2.cif.gz_B | 4 | 522 | 258 | 711 | 0.4681 |
0.617 |
| 3a23-assembly2.cif.gz_B | 11 | 511 | 5 | 387 | 0.4282 |
0.6127 |
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.