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Cluster: HRGMv2_2312_CGC38

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2312_20 HRGMv2_2312_20_30 39613 40371 + GT2
TC HRGMv2_2312_20 HRGMv2_2312_20_31 40452 41933 + 9.B.18.1.3
NULL(UNKNOWN) HRGMv2_2312_20 HRGMv2_2312_20_32 41977 42999 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2312_20 HRGMv2_2312_20_33 43015 43842 + GT2
pfam HRGMv2_2312_20 HRGMv2_2312_20_34 43874 45013 + EpsG
CAZyme HRGMv2_2312_20 HRGMv2_2312_20_35 45063 46439 + GT4
CAZyme HRGMv2_2312_20 HRGMv2_2312_20_36 46504 47727 + GT4
CAZyme HRGMv2_2312_20 HRGMv2_2312_20_37 47706 48701 + GT2
CAZyme HRGMv2_2312_20 HRGMv2_2312_20_38 49273 51465 + GH73
NULL(UNKNOWN) HRGMv2_2312_20 HRGMv2_2312_20_39 51545 52585 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_2312_20 HRGMv2_2312_20_40 52610 53833 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2312_20 HRGMv2_2312_20_41 53811 55715 + 9.B.18.2.1
TC HRGMv2_2312_20 HRGMv2_2312_20_42 55715 56350 + 9.B.18.1.3
pfam HRGMv2_2312_20 HRGMv2_2312_20_43 56414 57337 + 3Beta_HSD | Epimerase | RmlD_sub_bind | NAD_binding_4 | NAD_binding_10
pfam HRGMv2_2312_20 HRGMv2_2312_20_44 57409 58494 + Glycos_transf_2 | GtrA_DPMS_TM
CAZyme HRGMv2_2312_20 HRGMv2_2312_20_45 58500 59252 + GT2
Gene ID: HRGMv2_2312_20_30
Type: CAZyme
Location: 39613 - 40371 (+)
Gene ID: HRGMv2_2312_20_31
Type: TC
Location: 40452 - 41933 (+)
Gene ID: HRGMv2_2312_20_32
Type:
Location: 41977 - 42999 (+)
Gene ID: HRGMv2_2312_20_33
Type: CAZyme
Location: 43015 - 43842 (+)
Gene ID: HRGMv2_2312_20_34
Type: pfam
Location: 43874 - 45013 (+)
Gene ID: HRGMv2_2312_20_35
Type: CAZyme
Location: 45063 - 46439 (+)
Gene ID: HRGMv2_2312_20_36
Type: CAZyme
Location: 46504 - 47727 (+)
Gene ID: HRGMv2_2312_20_37
Type: CAZyme
Location: 47706 - 48701 (+)
Gene ID: HRGMv2_2312_20_38
Type: CAZyme
Location: 49273 - 51465 (+)
Gene ID: HRGMv2_2312_20_39
Type:
Location: 51545 - 52585 (+)
Gene ID: HRGMv2_2312_20_40
Type:
Location: 52610 - 53833 (+)
Gene ID: HRGMv2_2312_20_41
Type: TC
Location: 53811 - 55715 (+)
Gene ID: HRGMv2_2312_20_42
Type: TC
Location: 55715 - 56350 (+)
Gene ID: HRGMv2_2312_20_43
Type: pfam
Location: 56414 - 57337 (+)
Gene ID: HRGMv2_2312_20_44
Type: pfam
Location: 57409 - 58494 (+)
Gene ID: HRGMv2_2312_20_45
Type: CAZyme
Location: 58500 - 59252 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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