PROTEIN: HRGMv2_2312_20_40
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Protein File & Metadata
Source:
HRGMv2_2312_20_40.pdb
Genome ID:
Protein ID:
HRGMv2_2312_20_40
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Protein Sequence
MTKGEKKLIE AITKYKSLLF FLAVSLIGAY VRYNARAFIS EDMSYYLLDW FDQIKENGIF 60 SLKEQVGNYN ILYQTMIALM TYIPWKPVYL IKCFSILFDY LLAFSVADFI RKQFGEHRKS 120 LYFLVPYGVV LLLPTVVLNS AYWGQCDAMY TFFIFEAMVT LYEEKYRRCF FLFGMALAFK 180 LQAIFFLPFV ICLYFYRKKF SLFNLLITIG SFWLSGLPAY FMGRGLLTPF SVYIAQSDEY 240 RAMYLNISSF WIFVGGHYDF LKSLAIGVTF ALLGIGLFVV MSGRKKLDTP EEYLGFLCWT 300 LWTCTMYLPA MHERYTFLLD IMLIALVAVQ VRYLPYAVLS VLLSTITYGN YLFQNGAVDK 360 YFAAVQVGMW FAFTYQIFLK QTASPQAQVS GEACRRDGGE NEKREGC 407
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A077ZBX5-F1-model_v4 | 1 | 387 | 2 | 491 | 0.726 |
0.8457 |
| AF-A0A0J9XRE5-F1-model_v4 | 11 | 396 | 19 | 538 | 0.7041 |
0.8531 |
| AF-A0A0K0IZP2-F1-model_v4 | 13 | 383 | 5 | 484 | 0.7038 |
0.8575 |
| AF-Q12001-F1-model_v4 | 10 | 387 | 28 | 543 | 0.7033 |
0.8731 |
| AF-A0A044UW34-F1-model_v4 | 11 | 392 | 19 | 535 | 0.7001 |
0.8576 |
| AF-A0A3P7ESX3-F1-model_v4 | 13 | 383 | 9 | 505 | 0.6948 |
0.8614 |
| AF-Q09226-F1-model_v4 | 13 | 386 | 41 | 503 | 0.6936 |
0.8424 |
| AF-Q7XIE1-F1-model_v4 | 14 | 391 | 24 | 515 | 0.6931 |
0.8428 |
| AF-G4VBL6-F1-model_v4 | 10 | 382 | 1 | 510 | 0.6921 |
0.8466 |
| AF-A0A1D6K1R5-F1-model_v4 | 15 | 390 | 27 | 516 | 0.6884 |
0.8424 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A5B8MC91-F1-model_v4 | GT57 | 12 | 387 | 5 | 485 | 0.7099 |
0.8487 |
| AF-F0W2I4-F1-model_v4 | GT57 | 9 | 391 | 15 | 531 | 0.707 |
0.8617 |
| AF-F1L3G4-F1-model_v4 | GT57 | 13 | 387 | 17 | 493 | 0.7046 |
0.8501 |
| AF-A0A099P6A5-F1-model_v4 | GT57 | 10 | 387 | 29 | 534 | 0.704 |
0.8679 |
| AF-S6D4W4-F1-model_v4 | GT57 | 11 | 355 | 1 | 398 | 0.7038 |
0.8367 |
| AF-A0A7H9B7A4-F1-model_v4 | GT57 | 9 | 388 | 27 | 544 | 0.7037 |
0.8695 |
| AF-G8ZY47-F1-model_v4 | GT57 | 10 | 387 | 28 | 541 | 0.7037 |
0.8723 |
| AF-F1KYR5-F1-model_v4 | GT57 | 13 | 387 | 17 | 493 | 0.7028 |
0.8483 |
| AF-C8ZHW5-F1-model_v4 | GT57 | 9 | 387 | 27 | 543 | 0.7019 |
0.8691 |
| AF-Q6C8U0-F1-model_v4 | GT57 | 9 | 386 | 53 | 542 | 0.7019 |
0.8699 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| UJR26363.1 | GT57 | 16 | 397 | 1 | 489 | 0.7186 |
0.8457 |
| A0A5B8MC91 | GT57 | 12 | 387 | 5 | 485 | 0.7099 |
0.8487 |
| F0W2I4 | GT57 | 9 | 391 | 15 | 531 | 0.707 |
0.8617 |
| F1KYR5 | GT57 | 13 | 387 | 17 | 493 | 0.7028 |
0.8483 |
| A0A8J9SCW7 | GT57 | 12 | 398 | 12 | 532 | 0.7 |
0.8425 |
| A8XHZ8 | GT57 | 15 | 386 | 24 | 488 | 0.699 |
0.8426 |
| A0A834R6C9 | GT57 | 17 | 391 | 1 | 483 | 0.698 |
0.8383 |
| A0A383VJ10 | GT57 | 17 | 386 | 1 | 491 | 0.6969 |
0.8519 |
| A0A0F7SHH8 | GT58 | 13 | 393 | 29 | 443 | 0.6903 |
0.794 |
| A0A9Y1D1H7 | GT57 | 14 | 390 | 7 | 497 | 0.6903 |
0.8455 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q12001-F1-model_v4 | 10 | 387 | 28 | 543 | 0.7033 |
0.8731 |
| AF-Q3T1L5-F1-model_v4 | 15 | 394 | 1 | 507 | 0.7022 |
0.8429 |
| AF-Q09226-F1-model_v4 | 13 | 386 | 41 | 503 | 0.6936 |
0.8424 |
| AF-Q9FF17-F1-model_v4 | 14 | 387 | 35 | 526 | 0.6824 |
0.8484 |
| AF-Q8NNM0-F1-model_v4 | 13 | 365 | 68 | 460 | 0.6034 |
0.7646 |