dbCAN Logo

Cluster: HRGMv2_2312_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2312_5 HRGMv2_2312_5_31 40321 41697 + 2.A.66.1.32
TC HRGMv2_2312_5 HRGMv2_2312_5_32 41702 43573 + 3.A.1.135.3
TC HRGMv2_2312_5 HRGMv2_2312_5_33 43560 45335 + 3.A.1.111.2
pfam HRGMv2_2312_5 HRGMv2_2312_5_34 45550 46434 + Transposase_31
STP HRGMv2_2312_5 HRGMv2_2312_5_35 46659 47597 + PALP
TC HRGMv2_2312_5 HRGMv2_2312_5_36 47668 48678 + 3.A.1.24.2
TC HRGMv2_2312_5 HRGMv2_2312_5_37 48668 49330 + 3.A.1.24.5
TC HRGMv2_2312_5 HRGMv2_2312_5_38 49454 50263 + 3.A.1.24.5
TF HRGMv2_2312_5 HRGMv2_2312_5_39 50281 50721 + Rrf2
NULL(UNKNOWN) HRGMv2_2312_5 HRGMv2_2312_5_40 50800 51924 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2312_5 HRGMv2_2312_5_41 52219 54276 + GH127
Gene ID: HRGMv2_2312_5_31
Type: TC
Location: 40321 - 41697 (+)
Gene ID: HRGMv2_2312_5_32
Type: TC
Location: 41702 - 43573 (+)
Gene ID: HRGMv2_2312_5_33
Type: TC
Location: 43560 - 45335 (+)
Gene ID: HRGMv2_2312_5_34
Type: pfam
Location: 45550 - 46434 (+)
Gene ID: HRGMv2_2312_5_35
Type: STP
Location: 46659 - 47597 (+)
Gene ID: HRGMv2_2312_5_36
Type: TC
Location: 47668 - 48678 (+)
Gene ID: HRGMv2_2312_5_37
Type: TC
Location: 48668 - 49330 (+)
Gene ID: HRGMv2_2312_5_38
Type: TC
Location: 49454 - 50263 (+)
Gene ID: HRGMv2_2312_5_39
Type: TF
Location: 50281 - 50721 (+)
Gene ID: HRGMv2_2312_5_40
Type:
Location: 50800 - 51924 (-)
Gene ID: HRGMv2_2312_5_41
Type: CAZyme
Location: 52219 - 54276 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List