PROTEIN: HRGMv2_2312_5_40
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Protein File & Metadata
Source:
HRGMv2_2312_5_40.pdb
Genome ID:
Protein ID:
HRGMv2_2312_5_40
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Protein Sequence
MNESDLTRNA AMLHGSLSKR GYCRWWHSFC GVQKETGAVR TFFVEFYILN PGLGGSQPIL 60 GQHPYCRKKG LKPSYVCIKA GVLPDGEGNS GRQFHAFYPI EALKATPSPL VMQVGDCFYS 120 EERIYGFVDV SREEARHKSL MSDAGSMEWD LEVHKAVACH TGFLSGAFLQ FFNALDSYWH 180 GEGIKSFFRG TVILDGVSYE VEPETSNGYA DKHWGRNFNR PWIQIGCGSL TSEKNNRVLK 240 HSCLAVNGCC PRFLFLPLKR KLLLQLTYMG EDFEFGISPF LLSRCKWETK ETNRRYIWHI 300 IARNKNAVIK ISCSCTREEL MQMQYENPEG IKSRRPLLAG GNGVGTIQLY RRTPGGRELL 360 DTLHMENTFC EYQA 374
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P9WKU7-F1-model_v4 | 1 | 374 | 10 | 315 | 0.7444 |
0.8638 |
| AF-Q6K7V6-F1-model_v4 | 2 | 374 | 58 | 432 | 0.7131 |
0.8068 |
| AF-Q94FY8-F1-model_v4 | 2 | 374 | 62 | 436 | 0.71 |
0.8061 |
| AF-I1K9C2-F1-model_v4 | 2 | 374 | 66 | 439 | 0.7064 |
0.8059 |
| AF-I1JUU2-F1-model_v4 | 2 | 374 | 75 | 450 | 0.6999 |
0.8048 |
| AF-Q94FY7-F1-model_v4 | 2 | 374 | 73 | 446 | 0.6982 |
0.8026 |
| AF-Q9HGN8-F1-model_v4 | 2 | 374 | 13 | 346 | 0.6939 |
0.771 |
| AF-C0NFT1-F1-model_v4 | 1 | 374 | 38 | 378 | 0.6857 |
0.7719 |
| AF-Q9I586-F1-model_v4 | 2 | 374 | 34 | 336 | 0.6827 |
0.8139 |
| AF-Q5ABA2-F1-model_v4 | 1 | 374 | 41 | 379 | 0.6792 |
0.7704 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A160T0N8-F1-model_v4 | GH2 | 3 | 374 | 58 | 378 | 0.6155 |
0.7389 |
| A0A9W4FCC3 | GT1 | 2 | 374 | 792 | 1142 | 0.3934 |
0.6721 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A160T0N8 | GH2 | 3 | 374 | 58 | 378 | 0.6155 |
0.7389 |
| A0A9W4FCC3 | GT1 | 2 | 374 | 792 | 1142 | 0.3934 |
0.6721 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 7a0q-assembly1.cif.gz_A | 1 | 374 | 12 | 319 | 0.6692 |
0.771 |
| 2ich-assembly2.cif.gz_B | 3 | 374 | 10 | 321 | 0.667 |
0.7595 |
| 2ich-assembly1.cif.gz_A | 3 | 374 | 9 | 319 | 0.6667 |
0.7581 |
| 7dmn-assembly1.cif.gz_A | 4 | 374 | 28 | 367 | 0.6635 |
0.7393 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P9WKU7-F1-model_v4 | 1 | 374 | 10 | 315 | 0.7444 |
0.8638 |
| AF-P9WKU6-F1-model_v4 | 1 | 374 | 10 | 315 | 0.7437 |
0.8629 |
| AF-Q6K7V6-F1-model_v4 | 2 | 374 | 58 | 432 | 0.7131 |
0.8068 |
| AF-Q94FY8-F1-model_v4 | 2 | 374 | 62 | 436 | 0.71 |
0.8061 |
| AF-Q94FY7-F1-model_v4 | 2 | 374 | 73 | 446 | 0.6982 |
0.8026 |
| AF-Q9HGN8-F1-model_v4 | 2 | 374 | 13 | 346 | 0.6939 |
0.771 |
| AF-Q5BH63-F1-model_v4 | 1 | 374 | 37 | 378 | 0.6808 |
0.7644 |
| AF-Q5ABA2-F1-model_v4 | 1 | 374 | 41 | 379 | 0.6792 |
0.7704 |
| AF-Q9F723-F1-model_v4 | 3 | 374 | 4 | 334 | 0.673 |
0.78 |
| AF-Q0V6Q4-F1-model_v4 | 4 | 374 | 14 | 343 | 0.6686 |
0.7567 |