Cluster: HRGMv2_2310_CGC21
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2310
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2310_99 | HRGMv2_2310_99_1 | 1 | 1416 | + | 9.B.18.1.2 |
| pfam | HRGMv2_2310_99 | HRGMv2_2310_99_2 | 1480 | 1995 | + | VanZ |
| CAZyme | HRGMv2_2310_99 | HRGMv2_2310_99_3 | 2239 | 4665 | + | GH73 |
| pfam | HRGMv2_2310_99 | HRGMv2_2310_99_4 | 4691 | 6529 | + | Cadherin-like |
| peptidase | HRGMv2_2310_99 | HRGMv2_2310_99_5 | 6561 | 7952 | + | M20.UPF |
| TC | HRGMv2_2310_99 | HRGMv2_2310_99_6 | 8053 | 9267 | + | 2.A.22.5.3 |
Gene ID: HRGMv2_2310_99_1
Type: TC
Location: 1 - 1416 (+)
Type: TC
Location: 1 - 1416 (+)
Gene ID: HRGMv2_2310_99_2
Type: pfam
Location: 1480 - 1995 (+)
Type: pfam
Location: 1480 - 1995 (+)
Gene ID: HRGMv2_2310_99_3
Type: CAZyme
Location: 2239 - 4665 (+)
Type: CAZyme
Location: 2239 - 4665 (+)
Gene ID: HRGMv2_2310_99_4
Type: pfam
Location: 4691 - 6529 (+)
Type: pfam
Location: 4691 - 6529 (+)
Gene ID: HRGMv2_2310_99_5
Type: peptidase
Location: 6561 - 7952 (+)
Type: peptidase
Location: 6561 - 7952 (+)
Gene ID: HRGMv2_2310_99_6
Type: TC
Location: 8053 - 9267 (+)
Type: TC
Location: 8053 - 9267 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Alitiscatomonas
Species
Alitiscatomonas sp900541255
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.