Cluster: HRGMv2_2310_CGC2
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2310
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2310_1 | HRGMv2_2310_1_37 | 42287 | 43177 | - | 3.A.1.1.10 |
| TC | HRGMv2_2310_1 | HRGMv2_2310_1_38 | 43186 | 44241 | - | 3.A.1.1.10 |
| NULL(UNKNOWN) | HRGMv2_2310_1 | HRGMv2_2310_1_39 | 44339 | 44926 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2310_1 | HRGMv2_2310_1_40 | 45169 | 46029 | + | CE8 |
Gene ID: HRGMv2_2310_1_37
Type: TC
Location: 42287 - 43177 (-)
Type: TC
Location: 42287 - 43177 (-)
Gene ID: HRGMv2_2310_1_38
Type: TC
Location: 43186 - 44241 (-)
Type: TC
Location: 43186 - 44241 (-)
Gene ID: HRGMv2_2310_1_39
Type:
Location: 44339 - 44926 (-)
Type:
Location: 44339 - 44926 (-)
Gene ID: HRGMv2_2310_1_40
Type: CAZyme
Location: 45169 - 46029 (+)
Type: CAZyme
Location: 45169 - 46029 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Alitiscatomonas
Species
Alitiscatomonas sp900541255
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.