Cluster: HRGMv2_2310_CGC19
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2310
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2310_73 | HRGMv2_2310_73_1 | 321 | 1652 | - | 2.A.25.1.4 |
| pfam | HRGMv2_2310_73 | HRGMv2_2310_73_2 | 1762 | 2757 | + | Zn_dep_PLPC |
| peptidase | HRGMv2_2310_73 | HRGMv2_2310_73_3 | 2871 | 3572 | + | C26.UPW |
| TC | HRGMv2_2310_73 | HRGMv2_2310_73_4 | 3664 | 5037 | - | 2.A.40.7.6 |
| NULL(UNKNOWN) | HRGMv2_2310_73 | HRGMv2_2310_73_5 | 5261 | 5881 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2310_73 | HRGMv2_2310_73_6 | 6023 | 6988 | - | GT2 |
Gene ID: HRGMv2_2310_73_1
Type: TC
Location: 321 - 1652 (-)
Type: TC
Location: 321 - 1652 (-)
Gene ID: HRGMv2_2310_73_2
Type: pfam
Location: 1762 - 2757 (+)
Type: pfam
Location: 1762 - 2757 (+)
Gene ID: HRGMv2_2310_73_3
Type: peptidase
Location: 2871 - 3572 (+)
Type: peptidase
Location: 2871 - 3572 (+)
Gene ID: HRGMv2_2310_73_4
Type: TC
Location: 3664 - 5037 (-)
Type: TC
Location: 3664 - 5037 (-)
Gene ID: HRGMv2_2310_73_5
Type:
Location: 5261 - 5881 (-)
Type:
Location: 5261 - 5881 (-)
Gene ID: HRGMv2_2310_73_6
Type: CAZyme
Location: 6023 - 6988 (-)
Type: CAZyme
Location: 6023 - 6988 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Alitiscatomonas
Species
Alitiscatomonas sp900541255
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.