Cluster: HRGMv2_2310_CGC16
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2310
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2310_51 | HRGMv2_2310_51_4 | 3144 | 4229 | + | GT28 |
| STP | HRGMv2_2310_51 | HRGMv2_2310_51_5 | 4214 | 4744 | - | Sigma70_r4_2 |
| pfam | HRGMv2_2310_51 | HRGMv2_2310_51_6 | 4762 | 5184 | - | HIT | DcpS_C |
| TC | HRGMv2_2310_51 | HRGMv2_2310_51_7 | 5171 | 5797 | - | 9.B.104.1.3 |
Gene ID: HRGMv2_2310_51_4
Type: CAZyme
Location: 3144 - 4229 (+)
Type: CAZyme
Location: 3144 - 4229 (+)
Gene ID: HRGMv2_2310_51_5
Type: STP
Location: 4214 - 4744 (-)
Type: STP
Location: 4214 - 4744 (-)
Gene ID: HRGMv2_2310_51_6
Type: pfam
Location: 4762 - 5184 (-)
Type: pfam
Location: 4762 - 5184 (-)
Gene ID: HRGMv2_2310_51_7
Type: TC
Location: 5171 - 5797 (-)
Type: TC
Location: 5171 - 5797 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Alitiscatomonas
Species
Alitiscatomonas sp900541255
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.