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Cluster: HRGMv2_2310_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2310_25 HRGMv2_2310_25_8 4788 5930 + 2.A.6.2.44
TC HRGMv2_2310_25 HRGMv2_2310_25_9 5934 8939 + 2.A.6.3.6
pfam HRGMv2_2310_25 HRGMv2_2310_25_10 8962 10122 + OEP | OEP
NULL(UNKNOWN) HRGMv2_2310_25 HRGMv2_2310_25_11 10137 11288 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2310_25 HRGMv2_2310_25_12 11291 12115 - 3.A.1.5.2
NULL(UNKNOWN) HRGMv2_2310_25 HRGMv2_2310_25_13 12340 12933 - NULL(UNKNOWN)
[View Structural Homologs]
peptidase HRGMv2_2310_25 HRGMv2_2310_25_14 13125 13997 + S66.UPW
CAZyme HRGMv2_2310_25 HRGMv2_2310_25_15 14053 14772 + CE4
Gene ID: HRGMv2_2310_25_8
Type: TC
Location: 4788 - 5930 (+)
Gene ID: HRGMv2_2310_25_9
Type: TC
Location: 5934 - 8939 (+)
Gene ID: HRGMv2_2310_25_10
Type: pfam
Location: 8962 - 10122 (+)
Gene ID: HRGMv2_2310_25_11
Type:
Location: 10137 - 11288 (+)
Gene ID: HRGMv2_2310_25_12
Type: TC
Location: 11291 - 12115 (-)
Gene ID: HRGMv2_2310_25_13
Type:
Location: 12340 - 12933 (-)
Gene ID: HRGMv2_2310_25_14
Type: peptidase
Location: 13125 - 13997 (+)
Gene ID: HRGMv2_2310_25_15
Type: CAZyme
Location: 14053 - 14772 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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