dbCAN Logo

Cluster: HRGMv2_2310_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2310_16 HRGMv2_2310_16_36 39223 40890 + GH18
pfam HRGMv2_2310_16 HRGMv2_2310_16_37 40982 41677 + Amidase_3
pfam HRGMv2_2310_16 HRGMv2_2310_16_38 41757 42698 + EamA | EamA
TC HRGMv2_2310_16 HRGMv2_2310_16_39 42732 43709 - 3.A.1.5.37
TC HRGMv2_2310_16 HRGMv2_2310_16_40 43722 44711 - 3.A.1.5.2
TC HRGMv2_2310_16 HRGMv2_2310_16_41 44725 45660 - 3.A.1.5.20
TC HRGMv2_2310_16 HRGMv2_2310_16_42 45665 46378 - 3.A.1.5.20
Gene ID: HRGMv2_2310_16_36
Type: CAZyme
Location: 39223 - 40890 (+)
Gene ID: HRGMv2_2310_16_37
Type: pfam
Location: 40982 - 41677 (+)
Gene ID: HRGMv2_2310_16_38
Type: pfam
Location: 41757 - 42698 (+)
Gene ID: HRGMv2_2310_16_39
Type: TC
Location: 42732 - 43709 (-)
Gene ID: HRGMv2_2310_16_40
Type: TC
Location: 43722 - 44711 (-)
Gene ID: HRGMv2_2310_16_41
Type: TC
Location: 44725 - 45660 (-)
Gene ID: HRGMv2_2310_16_42
Type: TC
Location: 45665 - 46378 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List