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Cluster: HRGMv2_2305_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2305_1 HRGMv2_2305_1_53 59019 59627 + 9.B.156.3.1
pfam HRGMv2_2305_1 HRGMv2_2305_1_54 59634 60806 - PucR | HTH_30
NULL(UNKNOWN) HRGMv2_2305_1 HRGMv2_2305_1_55 61009 61233 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2305_1 HRGMv2_2305_1_56 61426 63378 + 3.A.1.5.22
TC HRGMv2_2305_1 HRGMv2_2305_1_57 63378 64328 + 3.A.1.5.19
TC HRGMv2_2305_1 HRGMv2_2305_1_58 64328 65251 + 3.A.1.5.25
TC HRGMv2_2305_1 HRGMv2_2305_1_59 65268 66308 + 3.A.1.5.25
TC HRGMv2_2305_1 HRGMv2_2305_1_60 66317 67246 + 3.A.1.5.19
NULL(UNKNOWN) HRGMv2_2305_1 HRGMv2_2305_1_61 67258 67680 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2305_1 HRGMv2_2305_1_62 67759 69678 - GH20
TC HRGMv2_2305_1 HRGMv2_2305_1_63 69707 71071 - 2.A.66.1.33
NULL(UNKNOWN) HRGMv2_2305_1 HRGMv2_2305_1_64 71263 72048 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_2305_1 HRGMv2_2305_1_65 72104 72787 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2305_1 HRGMv2_2305_1_66 73311 74687 + 2.A.25.1.3
pfam HRGMv2_2305_1 HRGMv2_2305_1_67 75066 77024 + tRNA-synt_1 | tRNA-synt_1 | tRNA_bind | Anticodon_1 | tRNA-synt_1g | tRNA-synt_1g | Anticodon_3
TC HRGMv2_2305_1 HRGMv2_2305_1_68 77281 79887 + 3.A.3.2.21
TC HRGMv2_2305_1 HRGMv2_2305_1_69 79914 81047 + 2.A.86.1.8
Gene ID: HRGMv2_2305_1_53
Type: TC
Location: 59019 - 59627 (+)
Gene ID: HRGMv2_2305_1_54
Type: pfam
Location: 59634 - 60806 (-)
Gene ID: HRGMv2_2305_1_55
Type:
Location: 61009 - 61233 (+)
Gene ID: HRGMv2_2305_1_56
Type: TC
Location: 61426 - 63378 (+)
Gene ID: HRGMv2_2305_1_57
Type: TC
Location: 63378 - 64328 (+)
Gene ID: HRGMv2_2305_1_58
Type: TC
Location: 64328 - 65251 (+)
Gene ID: HRGMv2_2305_1_59
Type: TC
Location: 65268 - 66308 (+)
Gene ID: HRGMv2_2305_1_60
Type: TC
Location: 66317 - 67246 (+)
Gene ID: HRGMv2_2305_1_61
Type:
Location: 67258 - 67680 (+)
Gene ID: HRGMv2_2305_1_62
Type: CAZyme
Location: 67759 - 69678 (-)
Gene ID: HRGMv2_2305_1_63
Type: TC
Location: 69707 - 71071 (-)
Gene ID: HRGMv2_2305_1_64
Type:
Location: 71263 - 72048 (+)
Gene ID: HRGMv2_2305_1_65
Type:
Location: 72104 - 72787 (+)
Gene ID: HRGMv2_2305_1_66
Type: TC
Location: 73311 - 74687 (+)
Gene ID: HRGMv2_2305_1_67
Type: pfam
Location: 75066 - 77024 (+)
Gene ID: HRGMv2_2305_1_68
Type: TC
Location: 77281 - 79887 (+)
Gene ID: HRGMv2_2305_1_69
Type: TC
Location: 79914 - 81047 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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