PROTEIN: HRGMv2_2305_1_64
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Protein File & Metadata
Source:
HRGMv2_2305_1_64.pdb
Genome ID:
Protein ID:
HRGMv2_2305_1_64
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Protein Sequence
MKLRIRRADP AGNITLFVMS KADRKDYAAI SNQLLAMEEF GAEQVGFVEY QDNGKVHMQM 60 MGGEFCGNAT RSFGYLMSML STEKPSEVEV DVSGSAEPLK AEVNLEKGTS RTQMPLPVEI 120 VELPKIQGET YSMVVFEGIC HIIVKSAPRE QDFVDQVIQV AEKVCPADAY GVMFLEGEKM 180 TPVVNVKENG SMVWESSCGS GSMGAAVYLS HGKEDGTYVY ELHQPGGVIE ASVTIENGKV 240 IQCKMGGPVV ISDEMTVEIG G 261
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q2FVE4-F1-model_v4 | 1 | 261 | 4 | 273 | 0.805 |
0.85 |
| AF-A0A132Z6F5-F1-model_v4 | 3 | 259 | 1 | 266 | 0.7817 |
0.8228 |
| AF-A0A0H3GKE3-F1-model_v4 | 3 | 259 | 1 | 274 | 0.7785 |
0.8301 |
| AF-P0A1F2-F1-model_v4 | 3 | 259 | 1 | 274 | 0.7776 |
0.8298 |
| AF-P44859-F1-model_v4 | 3 | 259 | 1 | 274 | 0.777 |
0.8286 |
| AF-Q329Y5-F1-model_v4 | 2 | 259 | 1 | 275 | 0.7758 |
0.8271 |
| AF-Q51564-F1-model_v4 | 1 | 261 | 1 | 276 | 0.7755 |
0.8195 |
| AF-P0A6K1-F1-model_v4 | 3 | 259 | 1 | 274 | 0.7746 |
0.8274 |
| AF-Q9PMD8-F1-model_v4 | 3 | 260 | 1 | 249 | 0.7739 |
0.817 |
| AF-Q5F9Q4-F1-model_v4 | 1 | 261 | 2 | 283 | 0.7726 |
0.8253 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A2V1AJ98 | GT39 | 2 | 261 | 1 | 538 | 0.4796 |
0.7751 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 6jiw-assembly1.cif.gz_A-2 | 1 | 261 | 1 | 263 | 0.8508 |
0.8767 |
| 6jis-assembly1.cif.gz_A-2 | 1 | 259 | 1 | 263 | 0.8459 |
0.8787 |
| 6l4l-assembly1.cif.gz_A | 1 | 261 | 1 | 259 | 0.8291 |
0.856 |
| 2otn-assembly1.cif.gz_A | 1 | 261 | 8 | 292 | 0.7777 |
0.8424 |
| 7vdy-assembly1.cif.gz_B | 1 | 260 | 2 | 279 | 0.7763 |
0.8267 |
| 5ha4-assembly1.cif.gz_A | 1 | 261 | 1 | 280 | 0.7752 |
0.8242 |
| 5h2g-assembly1.cif.gz_B | 1 | 261 | 3 | 279 | 0.7748 |
0.8219 |
| 6d13-assembly1.cif.gz_A | 2 | 259 | 1 | 275 | 0.7694 |
0.8214 |
| 4ik0-assembly1.cif.gz_A | 3 | 259 | 1 | 274 | 0.7677 |
0.8209 |
| 1qy9-assembly2.cif.gz_C | 2 | 261 | 1 | 296 | 0.7584 |
0.8302 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A0H3JU78-F1-model_v4 | 1 | 260 | 4 | 273 | 0.8494 |
0.8927 |
| AF-A6L8U3-F1-model_v4 | 1 | 259 | 3 | 269 | 0.8039 |
0.8421 |
| AF-A6GYX5-F1-model_v4 | 3 | 257 | 1 | 256 | 0.7977 |
0.8294 |
| AF-Q9PJW2-F1-model_v4 | 1 | 261 | 8 | 268 | 0.7954 |
0.8281 |
| AF-A7GUE1-F1-model_v4 | 1 | 261 | 2 | 286 | 0.7948 |
0.8527 |
| AF-Q72YE7-F1-model_v4 | 1 | 261 | 2 | 286 | 0.7944 |
0.8522 |
| AF-C5D729-F1-model_v4 | 1 | 259 | 2 | 284 | 0.7944 |
0.853 |
| AF-Q632C7-F1-model_v4 | 1 | 261 | 2 | 286 | 0.7937 |
0.8518 |
| AF-O32114-F1-model_v4 | 1 | 259 | 2 | 284 | 0.7935 |
0.8519 |
| AF-B7HUS8-F1-model_v4 | 1 | 261 | 2 | 286 | 0.7929 |
0.851 |