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Cluster: HRGMv2_2302_CGC112

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2302_58 HRGMv2_2302_58_8 9674 11080 - 2.A.66.1.32
pfam HRGMv2_2302_58 HRGMv2_2302_58_9 11409 12722 - ATP-grasp_3 | ATP-grasp_4
CAZyme HRGMv2_2302_58 HRGMv2_2302_58_10 12719 13747 - GT2
NULL(UNKNOWN) HRGMv2_2302_58 HRGMv2_2302_58_11 13744 15219 - NULL(UNKNOWN)
[View Structural Homologs]
STP HRGMv2_2302_58 HRGMv2_2302_58_12 15258 16472 - Aminotran_1_2
TC HRGMv2_2302_58 HRGMv2_2302_58_13 16582 17577 - 9.B.18.2.1
pfam HRGMv2_2302_58 HRGMv2_2302_58_14 17738 19246 - SLFN_AlbA_2 | HATPase_c_4
CAZyme HRGMv2_2302_58 HRGMv2_2302_58_15 19272 21608 - GT2 | GT4
NULL(UNKNOWN) HRGMv2_2302_58 HRGMv2_2302_58_16 22169 22258 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2302_58 HRGMv2_2302_58_17 22542 23882 - GT4
CAZyme HRGMv2_2302_58 HRGMv2_2302_58_18 23885 24733 - GT2
Gene ID: HRGMv2_2302_58_8
Type: TC
Location: 9674 - 11080 (-)
Gene ID: HRGMv2_2302_58_9
Type: pfam
Location: 11409 - 12722 (-)
Gene ID: HRGMv2_2302_58_10
Type: CAZyme
Location: 12719 - 13747 (-)
Gene ID: HRGMv2_2302_58_11
Type:
Location: 13744 - 15219 (-)
Gene ID: HRGMv2_2302_58_12
Type: STP
Location: 15258 - 16472 (-)
Gene ID: HRGMv2_2302_58_13
Type: TC
Location: 16582 - 17577 (-)
Gene ID: HRGMv2_2302_58_14
Type: pfam
Location: 17738 - 19246 (-)
Gene ID: HRGMv2_2302_58_15
Type: CAZyme
Location: 19272 - 21608 (-)
Gene ID: HRGMv2_2302_58_16
Type:
Location: 22169 - 22258 (+)
Gene ID: HRGMv2_2302_58_17
Type: CAZyme
Location: 22542 - 23882 (-)
Gene ID: HRGMv2_2302_58_18
Type: CAZyme
Location: 23885 - 24733 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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