PROTEIN: HRGMv2_2302_58_11
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Protein File & Metadata
Source:
HRGMv2_2302_58_11.pdb
Genome ID:
Protein ID:
HRGMv2_2302_58_11
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Protein Sequence
MQTEERKSGG TGRHFEDIIP ESRGRIWNFL IWGSVVFFTL LYLSLIFNNN VWTDEIFSMN 60 LFRENFGQIV RDTAADVHPP LYYFLGRFFR LLFGESLQVQ KVLTIIPMSL TLVLGATKVR 120 RFFGNGVSFL FLIFLGCIPC SMEYAVQVRM YSWALLCVTA CGLAAWEVYR EGGWLSWIML 180 SVSAVAAAYL HYFSFVSVII INGLLLLVLL LTRDNRKKLG KWLLFSLAMV AAYLPWLPYF 240 YAQVTRVEAG YWIPPITAET VWSYFEWAFG LEPIPQTAFV YLGISLLAGM FCLLLMKKKE 300 RGMREKGGFA LLCMAVPALT AAVGIVLSLI KQPIYRDQYV FPAMGLFCLF LAIGFGRIRK 360 EAAVLLLAFV LFTGAVSYRD EYRAEYKATL TDQTEEFFRE NLGEDDFVVY NYQAYYFNYK 420 YYFPEDRLFY VRDVDLSQDF DEIWFLDTDF EWDFVPDQII PYNLQIEYVG HYGIEYNEFD 480 LYRVTKGGSA E 491
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q8ZP99-F1-model_v4 | 19 | 491 | 12 | 516 | 0.7948 |
0.8594 |
| AF-Q9HUZ2-F1-model_v4 | 13 | 490 | 1 | 478 | 0.7612 |
0.7912 |
| AF-Q9CC27-F1-model_v4 | 22 | 486 | 24 | 527 | 0.7599 |
0.844 |
| AF-O06152-F1-model_v4 | 23 | 486 | 53 | 556 | 0.7454 |
0.8491 |
| AF-A0A0R4IE52-F1-model_v4 | 20 | 491 | 1 | 499 | 0.7173 |
0.7697 |
| AF-Q9BV10-F1-model_v4 | 22 | 489 | 1 | 488 | 0.7139 |
0.7636 |
| AF-B1WBY3-F1-model_v4 | 22 | 489 | 2 | 488 | 0.7099 |
0.7597 |
| AF-Q8VDB2-F1-model_v4 | 21 | 489 | 2 | 486 | 0.7079 |
0.7546 |
| AF-G5EDN2-F1-model_v4 | 24 | 486 | 1 | 495 | 0.7043 |
0.7669 |
| AF-A0A5K4FC45-F1-model_v4 | 25 | 489 | 1 | 522 | 0.701 |
0.7775 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A0F0L4U4 | GT83 | 20 | 486 | 3 | 490 | 0.8068 |
0.8614 |
| AF-A0A6G6W340-F1-model_v4 | GT83 | 4 | 487 | 1 | 505 | 0.8031 |
0.8421 |
| AF-A0A4P6EGC6-F1-model_v4 | GT83 | 19 | 489 | 11 | 490 | 0.8009 |
0.8501 |
| AF-A0A2R2WBG4-F1-model_v4 | GT83 | 24 | 489 | 1 | 490 | 0.8001 |
0.8567 |
| A0A9E8QA45 | GT83 | 16 | 489 | 5 | 505 | 0.7995 |
0.855 |
| AF-A0A6P1FL66-F1-model_v4 | GT83 | 19 | 490 | 1 | 468 | 0.7991 |
0.835 |
| AF-A0A2X4U042-F1-model_v4 | GT83 | 24 | 490 | 1 | 508 | 0.7968 |
0.8659 |
| A0A0D5CKI4 | GT83 | 28 | 486 | 1 | 476 | 0.7955 |
0.8531 |
| UFS57809.1 | GT83 | 21 | 487 | 10 | 481 | 0.794 |
0.8428 |
| AF-A0A7L5ALX8-F1-model_v4 | GT83 | 20 | 487 | 19 | 507 | 0.7938 |
0.8604 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A0F0L4U4 | GT83 | 20 | 486 | 3 | 490 | 0.8068 |
0.8614 |
| A0A3S9W690 | GT83 | 20 | 488 | 6 | 512 | 0.8042 |
0.8725 |
| A0A387BP67 | GT83 | 24 | 491 | 1 | 477 | 0.8021 |
0.8463 |
| A0A4P6EGC6 | GT83 | 19 | 489 | 11 | 490 | 0.8009 |
0.8501 |
| A0A9E8QA45 | GT83 | 16 | 489 | 5 | 505 | 0.7995 |
0.855 |
| A0A2X4U042 | GT83 | 24 | 490 | 1 | 508 | 0.7968 |
0.8659 |
| BCY11543.1 | GT83 | 21 | 491 | 5 | 478 | 0.7955 |
0.8346 |
| A0A0D5CKI4 | GT83 | 28 | 486 | 1 | 476 | 0.7955 |
0.8531 |
| UFS57809.1 | GT83 | 21 | 487 | 10 | 481 | 0.794 |
0.8428 |
| A0A7L5ALX8 | GT83 | 20 | 487 | 19 | 507 | 0.7938 |
0.8604 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5ezm-assembly1.cif.gz_A | 24 | 487 | 1 | 537 | 0.6683 |
0.7527 |
| 5f15-assembly1.cif.gz_A | 25 | 487 | 1 | 541 | 0.6644 |
0.7524 |
| 6s7o-assembly1.cif.gz_A | 19 | 484 | 5 | 644 | 0.5972 |
0.7272 |
| 8age-assembly1.cif.gz_A | 19 | 483 | 4 | 607 | 0.5968 |
0.7227 |
| 7oci-assembly1.cif.gz_F | 20 | 489 | 4 | 620 | 0.5926 |
0.7088 |
| 8agb-assembly1.cif.gz_A | 20 | 490 | 3 | 624 | 0.5925 |
0.7087 |
| 6ezn-assembly1.cif.gz_F | 20 | 490 | 4 | 632 | 0.5891 |
0.7082 |
| 6c26-assembly1.cif.gz_A | 19 | 490 | 5 | 630 | 0.5888 |
0.706 |
| 8if8-assembly1.cif.gz_B | 15 | 484 | 61 | 613 | 0.5815 |
0.6883 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9BV10-F1-model_v4 | 22 | 489 | 1 | 488 | 0.7139 |
0.7636 |
| AF-O67601-F1-model_v4 | 27 | 485 | 1 | 416 | 0.7107 |
0.7878 |
| AF-Q8VDB2-F1-model_v4 | 21 | 489 | 2 | 486 | 0.7079 |
0.7546 |
| AF-Q7SXZ1-F1-model_v4 | 21 | 491 | 32 | 533 | 0.698 |
0.7729 |
| AF-Q6BH65-F1-model_v4 | 12 | 485 | 23 | 549 | 0.6951 |
0.7753 |
| AF-Q23361-F1-model_v4 | 31 | 488 | 1 | 492 | 0.6942 |
0.7603 |
| AF-Q5AK24-F1-model_v4 | 21 | 485 | 1 | 482 | 0.694 |
0.7434 |
| AF-O67270-F1-model_v4 | 24 | 486 | 1 | 498 | 0.6933 |
0.7574 |
| AF-Q6CAB8-F1-model_v4 | 21 | 484 | 9 | 510 | 0.6917 |
0.7608 |
| AF-Q1LZA0-F1-model_v4 | 19 | 489 | 35 | 537 | 0.6909 |
0.768 |