Cluster: HRGMv2_2300_CGC8
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2300
- CGC Family ID: CGCFAM_01465
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2300_2 | HRGMv2_2300_2_155 | 172196 | 174073 | - | GH13_11 |
| pfam | HRGMv2_2300_2 | HRGMv2_2300_2_156 | 174433 | 175320 | - | Radical_SAM | Fer4_12 |
| peptidase | HRGMv2_2300_2 | HRGMv2_2300_2_157 | 175327 | 175983 | - | S14.UPW |
| TC | HRGMv2_2300_2 | HRGMv2_2300_2_158 | 176596 | 177354 | + | 3.A.1.17.8 |
| TC | HRGMv2_2300_2 | HRGMv2_2300_2_159 | 177354 | 178133 | + | 3.A.1.16.3 |
Gene ID: HRGMv2_2300_2_155
Type: CAZyme
Location: 172196 - 174073 (-)
Type: CAZyme
Location: 172196 - 174073 (-)
Gene ID: HRGMv2_2300_2_156
Type: pfam
Location: 174433 - 175320 (-)
Type: pfam
Location: 174433 - 175320 (-)
Gene ID: HRGMv2_2300_2_157
Type: peptidase
Location: 175327 - 175983 (-)
Type: peptidase
Location: 175327 - 175983 (-)
Gene ID: HRGMv2_2300_2_158
Type: TC
Location: 176596 - 177354 (+)
Type: TC
Location: 176596 - 177354 (+)
Gene ID: HRGMv2_2300_2_159
Type: TC
Location: 177354 - 178133 (+)
Type: TC
Location: 177354 - 178133 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnospira
Species
Lachnospira sp900551945
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.