Cluster: HRGMv2_2300_CGC7
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2300
- CGC Family ID: CGCFAM_00234
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2300_2 | HRGMv2_2300_2_137 | 153737 | 154471 | - | 3.A.1.25.5 |
| NULL(UNKNOWN) | HRGMv2_2300_2 | HRGMv2_2300_2_138 | 154479 | 154865 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_2300_2 | HRGMv2_2300_2_139 | 155037 | 157685 | - | tRNA-synt_1 | Anticodon_1 | tRNA-synt_1g | tRNA-synt_1g | Val_tRNA-synt_C | tRNA-synt_1_2 |
| CAZyme | HRGMv2_2300_2 | HRGMv2_2300_2_140 | 157828 | 158607 | - | CE4 |
| TC | HRGMv2_2300_2 | HRGMv2_2300_2_141 | 158769 | 160097 | - | 2.A.66.1.33 |
Gene ID: HRGMv2_2300_2_137
Type: TC
Location: 153737 - 154471 (-)
Type: TC
Location: 153737 - 154471 (-)
Gene ID: HRGMv2_2300_2_138
Type:
Location: 154479 - 154865 (-)
Type:
Location: 154479 - 154865 (-)
Gene ID: HRGMv2_2300_2_139
Type: pfam
Location: 155037 - 157685 (-)
Type: pfam
Location: 155037 - 157685 (-)
Gene ID: HRGMv2_2300_2_140
Type: CAZyme
Location: 157828 - 158607 (-)
Type: CAZyme
Location: 157828 - 158607 (-)
Gene ID: HRGMv2_2300_2_141
Type: TC
Location: 158769 - 160097 (-)
Type: TC
Location: 158769 - 160097 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnospira
Species
Lachnospira sp900551945
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.