Cluster: HRGMv2_2300_CGC30
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2300
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2300_42 | HRGMv2_2300_42_7 | 3788 | 6418 | + | GH2 |
| TC | HRGMv2_2300_42 | HRGMv2_2300_42_8 | 6572 | 7093 | + | 2.A.78.1.1 |
| TC | HRGMv2_2300_42 | HRGMv2_2300_42_9 | 7090 | 7416 | + | 2.A.78.1.1 |
| NULL(UNKNOWN) | HRGMv2_2300_42 | HRGMv2_2300_42_10 | 7516 | 7728 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_2300_42 | HRGMv2_2300_42_11 | 7992 | 9290 | + | Enolase_C | Enolase_N |
| TC | HRGMv2_2300_42 | HRGMv2_2300_42_12 | 9747 | 11450 | + | 1.B.52.2.2 |
Gene ID: HRGMv2_2300_42_7
Type: CAZyme
Location: 3788 - 6418 (+)
Type: CAZyme
Location: 3788 - 6418 (+)
Gene ID: HRGMv2_2300_42_8
Type: TC
Location: 6572 - 7093 (+)
Type: TC
Location: 6572 - 7093 (+)
Gene ID: HRGMv2_2300_42_9
Type: TC
Location: 7090 - 7416 (+)
Type: TC
Location: 7090 - 7416 (+)
Gene ID: HRGMv2_2300_42_10
Type:
Location: 7516 - 7728 (+)
Type:
Location: 7516 - 7728 (+)
Gene ID: HRGMv2_2300_42_11
Type: pfam
Location: 7992 - 9290 (+)
Type: pfam
Location: 7992 - 9290 (+)
Gene ID: HRGMv2_2300_42_12
Type: TC
Location: 9747 - 11450 (+)
Type: TC
Location: 9747 - 11450 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnospira
Species
Lachnospira sp900551945
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.