Cluster: HRGMv2_2300_CGC29
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2300
- CGC Family ID: CGCFAM_00157
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2300_37 | HRGMv2_2300_37_10 | 10845 | 13358 | + | GH31_2 |
| TC | HRGMv2_2300_37 | HRGMv2_2300_37_11 | 13380 | 14423 | + | 2.A.56.1.1 |
| pfam | HRGMv2_2300_37 | HRGMv2_2300_37_12 | 14426 | 14914 | + | DctQ |
| TC | HRGMv2_2300_37 | HRGMv2_2300_37_13 | 14992 | 16293 | + | 2.A.56.1.5 |
Gene ID: HRGMv2_2300_37_10
Type: CAZyme
Location: 10845 - 13358 (+)
Type: CAZyme
Location: 10845 - 13358 (+)
Gene ID: HRGMv2_2300_37_11
Type: TC
Location: 13380 - 14423 (+)
Type: TC
Location: 13380 - 14423 (+)
Gene ID: HRGMv2_2300_37_12
Type: pfam
Location: 14426 - 14914 (+)
Type: pfam
Location: 14426 - 14914 (+)
Gene ID: HRGMv2_2300_37_13
Type: TC
Location: 14992 - 16293 (+)
Type: TC
Location: 14992 - 16293 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnospira
Species
Lachnospira sp900551945
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.