Cluster: HRGMv2_2300_CGC28
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2300
- CGC Family ID: CGCFAM_02897
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2300_36 | HRGMv2_2300_36_1 | 188 | 1876 | + | 1.B.52.2.2 |
| pfam | HRGMv2_2300_36 | HRGMv2_2300_36_2 | 1961 | 2503 | - | Rubrerythrin | RUBY_RBDX |
| TF | HRGMv2_2300_36 | HRGMv2_2300_36_3 | 2903 | 3301 | + | FUR |
| CAZyme | HRGMv2_2300_36 | HRGMv2_2300_36_4 | 3680 | 4738 | - | GT28 |
Gene ID: HRGMv2_2300_36_1
Type: TC
Location: 188 - 1876 (+)
Type: TC
Location: 188 - 1876 (+)
Gene ID: HRGMv2_2300_36_2
Type: pfam
Location: 1961 - 2503 (-)
Type: pfam
Location: 1961 - 2503 (-)
Gene ID: HRGMv2_2300_36_3
Type: TF
Location: 2903 - 3301 (+)
Type: TF
Location: 2903 - 3301 (+)
Gene ID: HRGMv2_2300_36_4
Type: CAZyme
Location: 3680 - 4738 (-)
Type: CAZyme
Location: 3680 - 4738 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnospira
Species
Lachnospira sp900551945
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.