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Cluster: HRGMv2_2300_CGC27

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2300_31 HRGMv2_2300_31_4 3858 5081 - GT4
CAZyme HRGMv2_2300_31 HRGMv2_2300_31_5 5099 6286 - GT4
CAZyme HRGMv2_2300_31 HRGMv2_2300_31_6 6295 7374 - GT4
NULL(UNKNOWN) HRGMv2_2300_31 HRGMv2_2300_31_7 7382 7804 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2300_31 HRGMv2_2300_31_8 7886 9475 - 2.A.50.2.1
NULL(UNKNOWN) HRGMv2_2300_31 HRGMv2_2300_31_9 9500 10591 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2300_31 HRGMv2_2300_31_10 10608 11657 - GT4
CAZyme HRGMv2_2300_31 HRGMv2_2300_31_11 11645 12835 - GT4
TC HRGMv2_2300_31 HRGMv2_2300_31_12 12858 14120 - 3.A.1.103.4
TC HRGMv2_2300_31 HRGMv2_2300_31_13 14136 14912 - 3.A.1.103.4
CAZyme HRGMv2_2300_31 HRGMv2_2300_31_14 14984 16258 - GT4
CAZyme HRGMv2_2300_31 HRGMv2_2300_31_15 16447 17553 - GT4
Gene ID: HRGMv2_2300_31_4
Type: CAZyme
Location: 3858 - 5081 (-)
Gene ID: HRGMv2_2300_31_5
Type: CAZyme
Location: 5099 - 6286 (-)
Gene ID: HRGMv2_2300_31_6
Type: CAZyme
Location: 6295 - 7374 (-)
Gene ID: HRGMv2_2300_31_7
Type:
Location: 7382 - 7804 (-)
Gene ID: HRGMv2_2300_31_8
Type: TC
Location: 7886 - 9475 (-)
Gene ID: HRGMv2_2300_31_9
Type:
Location: 9500 - 10591 (-)
Gene ID: HRGMv2_2300_31_10
Type: CAZyme
Location: 10608 - 11657 (-)
Gene ID: HRGMv2_2300_31_11
Type: CAZyme
Location: 11645 - 12835 (-)
Gene ID: HRGMv2_2300_31_12
Type: TC
Location: 12858 - 14120 (-)
Gene ID: HRGMv2_2300_31_13
Type: TC
Location: 14136 - 14912 (-)
Gene ID: HRGMv2_2300_31_14
Type: CAZyme
Location: 14984 - 16258 (-)
Gene ID: HRGMv2_2300_31_15
Type: CAZyme
Location: 16447 - 17553 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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